Gene Information

Name : M495_07050 (M495_07050)
Accession : YP_008229365.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1486846 - 1487517 bp
Length : 672 bp
Strand : +
Note : response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCGAATACTGGTGGTTGAAGACGACATCAGCACGGGTGATTACCTGAAAAAGGGGCTGGGAGAGGCGGGGTACAGCGT
CGATTTGGCACGTAACGGCACCGACGGCCTGTTTCGGGCACTGGAACACGGCTATGACGCTATCGTGCTGGACGTAATGT
TGCCGGGGCTGGACGGCTGGCAGATTATCGAGGTACTGCGCAAGAAAAGTGATGTGCCCATTCTATTTCTGACCGCACGA
GATGGGGTGCAGGATCGCATTCATGGCCTCGAACTGGGTGCCGATGATTACCTGATTAAGCCCTTCTCCTTTACGGAACT
GGTGTTGCGTCTGCGCACTTTGCTGCGGCGTGGCACGGTACGTGAAGCCGATCACTATGTGATAGCCGACCTGCAGCTCG
ACGTGCTGCGCCGTAAAGCGGTGCGGCAGGAGCAGGTGATCGCGCTGACCAATAAAGAATTTATGTTGTTGCACCTGTTG
GTGCGACGCGAGGGGGAGGTGTTGTCACGCACCATGATCGCCTCCCAGGTTTGGGACATGAACTTTGACAGCGATACCAA
CGTGGTGGATGTCGCCATCAAGCGGCTGCGTGCCAAGATTGACCGGCCGTTCGAGGTCAAGCTGATCCACAGCGTGCGTG
GTATCGGCTACGTTTGCGAACCGCGTTCATGA

Protein sequence : 
MRILVVEDDISTGDYLKKGLGEAGYSVDLARNGTDGLFRALEHGYDAIVLDVMLPGLDGWQIIEVLRKKSDVPILFLTAR
DGVQDRIHGLELGADDYLIKPFSFTELVLRLRTLLRRGTVREADHYVIADLQLDVLRRKAVRQEQVIALTNKEFMLLHLL
VRREGEVLSRTMIASQVWDMNFDSDTNVVDVAIKRLRAKIDRPFEVKLIHSVRGIGYVCEPRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-50 54
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-50 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_07050 YP_008229365.1 transcriptional regulator BAC0197 Protein 5e-60 64
M495_07050 YP_008229365.1 transcriptional regulator BAC0125 Protein 1e-61 63
M495_07050 YP_008229365.1 transcriptional regulator BAC0308 Protein 3e-55 61
M495_07050 YP_008229365.1 transcriptional regulator BAC0083 Protein 3e-57 60
M495_07050 YP_008229365.1 transcriptional regulator BAC0638 Protein 6e-50 60
M495_07050 YP_008229365.1 transcriptional regulator BAC0111 Protein 7e-54 56
M495_07050 YP_008229365.1 transcriptional regulator BAC0347 Protein 4e-46 52
M495_07050 YP_008229365.1 transcriptional regulator AE000516.2.gene3505. Protein 1e-29 42
M495_07050 YP_008229365.1 transcriptional regulator HE999704.1.gene1528. Protein 2e-28 41
M495_07050 YP_008229365.1 transcriptional regulator Y16952.3.orf35.gene. Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_07050 YP_008229365.1 transcriptional regulator VFG0596 Protein 1e-50 53
M495_07050 YP_008229365.1 transcriptional regulator VFG1390 Protein 2e-34 45
M495_07050 YP_008229365.1 transcriptional regulator VFG1386 Protein 7e-30 44
M495_07050 YP_008229365.1 transcriptional regulator VFG1389 Protein 3e-28 41