Gene Information

Name : M495_06905 (M495_06905)
Accession : YP_008229336.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1461994 - 1462740 bp
Length : 747 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAAATGAAAATGAACGCCTTCCTTGTCGCGAGCACCTTGTGTTGCGCACTGGGAGTTCAGTCTGCTTACGCCGCTAT
TGCGCTGGATCGAACCCGGGTGATTTTTGACGGTAGTGAGAAGTCAGTGAGTTTGAACGTCAGTAACGAGAACAAGCAAT
TGCCCTATCTGGCACAGGGATGGATTGAGGATGAAAAGGGCAACAAAATCACCAGCCCGTTGACGGTGTTGCCACCGGTG
CAGCGCATCGAGCCCGGCGCCAAGAGTCAGGTGAAGGTACAGGGCTTGCCGGCGCTGAGTACGTTACCTCAGGATCGCGA
ATCACTGTTCTATTTTAATTTGCGCGAAATTCCTCCGCGCAGTGAGAAACCGAACACGCTGCAAATCGCATTACAAACGC
GCATCAAACTGTTTTACCGGCCCCAGGCGATTCAGCCGGCGGCCTCGGCGTCACCGGCTCAGGAAGCATTAACGCTGAGC
AAGGTTGGGAACAAGTACAAACTGATCAATCCGACGCCGTACTTCGTCACTATCGTAGACGGCAGCAATAGCCCGAAGGG
ATTGCCTCTGAAGGGTTTTGAACCGCTGATGTTGGCGCCGAAAAGCGAAGGCATGTTGAATCTGAACGCAGAGGCACTGG
GTAGCAACCCGGTACTGACCTACATAAACGACTATGGCGGGCGACCACAGCTCCAGTTTACCTGTGCGGGCAGTACCTGC
CAGGCTAAGTCGCTAAAAAACGGTTAA

Protein sequence : 
MKMKMNAFLVASTLCCALGVQSAYAAIALDRTRVIFDGSEKSVSLNVSNENKQLPYLAQGWIEDEKGNKITSPLTVLPPV
QRIEPGAKSQVKVQGLPALSTLPQDRESLFYFNLREIPPRSEKPNTLQIALQTRIKLFYRPQAIQPAASASPAQEALTLS
KVGNKYKLINPTPYFVTIVDGSNSPKGLPLKGFEPLMLAPKSEGMLNLNAEALGSNPVLTYINDYGGRPQLQFTCAGSTC
QAKSLKNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-55 57
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 1e-55 57
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 2e-55 57
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 2e-55 56
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 2e-55 56
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-55 56
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 5e-48 55
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 4e-57 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_06905 YP_008229336.1 hypothetical protein VFG1547 Protein 7e-56 57
M495_06905 YP_008229336.1 hypothetical protein VFG0896 Protein 9e-56 56
M495_06905 YP_008229336.1 hypothetical protein VFG0885 Protein 2e-48 55