|
Name : J451_03960 (J451_03960) Accession : YP_008222182.1 Strain : Mannheimia haemolytica D174 Genome accession: NC_021739 Putative virulence/resistance : Virulence Product : protein disaggregation chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 737084 - 739651 bp Length : 2568 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAATTTTGAAAAAATGACCACAAAACTGCAAGAAGCCTTGGCTGAATCACAGTCGCTTGCGGTAGGAAAAGATAATCC GTACATCGAACCGGCACATTTGCTCTATGCGTTGTTAAAACAAGAAGGTGGCTCGATTGCTTCTTTGTTTACCACATTAA ATGTTGATGTACCGACTTTAATTCGTGAATTACAACAAATTTTAGACCGCTTGCCGAAAGTTCAAGGCGGTAACACCCAA GTTTCACAACAGTTGGTCAGACTGTTAAATCAATCAGACAAACTGGCACAACAATTCGGCGACAGCTTTATTTCATCAGA ACTATTTGTTCTAGCTGCACTTGATGACAATGGCGATTTGGGGAAACTATTTAAACAATTTGGCTTAAACAAGGAAAAAC TAACACAAGCCATCAGCCAAATTCGAGGAGGAGACACAGTGAATAATCAAAATGCGGAAGATACCCGCCAAGCACTCAAA AAATATACGATTGATTTAACCGAAAGAGCCAAAGCCGGTAAATTAGACCCGGTTATCGGGCGTGATGAAGAAATTCGCCG TGCGGTGCAAGTCTTACAACGCCGTACCAAAAACAACCCTGTGTTAATTGGTGAACCGGGTGTGGGGAAAACGGCGATTG TAGAAGGCTTGGCACAGCGTATTGTAAACGGCGAAGTGCCGGAAGGCTTGAAAAATAAGCGTGTACTTTCGCTGGATATG GGAGCATTAATTGCCGGTGCGAAATATCGTGGTGAATTTGAAGAGCGTTTAAAAGCGGTTTTAAACGACCTGGCGAAAGA AGAAGGGCAAGTTATCCTCTTTATTGATGAAATTCACACGATGGTTGGAGCAGGCAAAACAGACGGAGCAATGGACGCCG GCAACTTATTAAAACCAAGCCTTGCCCGTGGTGAATTGCACTGTGTGGGGGCTACAACCCTTGATGAATATCGCCAATAC ATTGAAAAAGACGCAGCCCTTGAACGCCGTTTCCAAAAAGTATTGGTGGACGAACCAACGGTTGAAGATACGATTGCGAT TTTACGTGGTTTGAAAGAGCGTTATGAAATCCATCATCACGTTCAAATTACAGACCCTGCCATCGTGGCGGCGGCAACGC TTTCGCACCGTTATGTGTCTGACCGTCAATTGCCGGATAAAGCGATTGACTTGATTGATGAAGCCGCTTCAAGCCTGCGT ATGGAGATTGATTCTAAACCTGAGCCGTTGGATAAATTAGAACGCCGCATTATCCAACTCAAATTGGAACGCCAAGCGTT ACAAAAAGAGGAAGATGAAGCGAGCCGTCAGCGTTTAGCCAAATTAGACGAAGAAATGGCAGCGAAAGAGCGTGAATATT CCGAGCTGGAAGAAATCTGGAAAGCGGAAAAATCCGCCTTACTTGGTACACAGCATATTAAATCGGAGTTGGAAAATGCC CGAATTGCGATGGATCAGGCTCGCCGTGAAAACGATTTCGAGAAGATGTCGGAATTGCAATATGGCGTGATTCCAAACTT GGAAAAACAGTTACAAGCGGTCGAAAATGGCGAAAAAAATGCAGATGCTCAGCTCCTCCGTACTAAAGTCACCGAAGAGG AAATTGCGGAAGTGCTTTCAAAAGCAACGGGCATTCCTGTTGCAAAAATGATGGAAGGCGAGAAGGAAAAACTCCTTCGT ATGGAAGAAGTATTACACGCTCGGGTTATCGGGCAAAATGAAGCCGTTGATGCGGTGGCAAATGCGATTCGCCGTAGCCG TGCCGGACTTTCCGATCCGAATAAACCGATTGGTTCATTCCTATTCTTAGGACCGACCGGCGTGGGTAAAACCGAGTTAA GCAAAACCTTAGCTAATTTCTTGTTTGACGATCCTGATGCTATGGTGCGAATTGATATGTCTGAATTTATGGAAAAACAC AGCGTATCCCGCTTAGTGGGCGCACCTCCGGGCTATGTCGGCTACGAAGAAGGCGGCTATTTGACCGAAGCGGTTCGCCG CCATCCATATTCGGTAGTGTTACTTGATGAAGTGGAAAAAGCTCACCCTGATGTGTTTAACATTTTATTGCAAGTGTTAG ATGACGGGCGTTTAACCGACGGGCAAGGCAGAACAGTCGATTTCCGCAATACAGTAGTGATTATGACCTCAAACTTAGGC TCGCATTTAATTCGAGAAAATGCGTATAAAGGCTATGATGTGGTTAAAGAAATGGTGATGGAAGTCGTCGGACAGCACTT CCGCCCTGAATTTATCAACCGTATTGATGAAACGGTGATGTTCCACTCACTTGGTCAAGAGCATATCCGTTCGATTGCGA AGATTCAGCTACAACGCTTAATCCAACGCTTGGCAGAACGAGGCTATGAGGTGACAGTAACCGATGCAGCATTAGATCAT ATCGGCAAGGCTGGTTTCGATCCGCTGTTCGGAGCAAGACCACTGAAACGTGCGATTCAACAAGAGCTTGAAAATCCGCT TGCTCAACAGATCTTAAGCGGTAAATTATTACCGAATAAAGCCGTTACGGTGGATTACCAAAACGGGCAGATTGTTGCAA CACAATAA Protein sequence : MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALLKQEGGSIASLFTTLNVDVPTLIRELQQILDRLPKVQGGNTQ VSQQLVRLLNQSDKLAQQFGDSFISSELFVLAALDDNGDLGKLFKQFGLNKEKLTQAISQIRGGDTVNNQNAEDTRQALK KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDM GALIAGAKYRGEFEERLKAVLNDLAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQY IEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSLR MEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKEREYSELEEIWKAEKSALLGTQHIKSELENA RIAMDQARRENDFEKMSELQYGVIPNLEKQLQAVENGEKNADAQLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLR MEEVLHARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDDPDAMVRIDMSEFMEKH SVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG SHLIRENAYKGYDVVKEMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAALDH IGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNKAVTVDYQNGQIVATQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-162 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| J451_03960 | YP_008222182.1 | protein disaggregation chaperone | VFG0079 | Protein | 9e-144 | 42 |
