Gene Information

Name : J451_07895 (J451_07895)
Accession : YP_008222921.1
Strain : Mannheimia haemolytica D174
Genome accession: NC_021739
Putative virulence/resistance : Virulence
Product : sugar ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1545143 - 1545940 bp
Length : 798 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :

ATGCGATATGGTGATAATACAACCTTTAAACGTTCCTGTGTGATTCAAAAACGGGTGATTCACGCCCTTTTAATGAGGGA
ATTAATTACTCGTTATGGGCGTAAAAATATTGGCTTCTTATGGCTTTTTATCGAACCATTATTGTTAACGTTAGTGATTA
CTGTTGCTTGGAAATATATAAAAGCAGATAAGTTTTCAACTTTAAATATTATCGCTTTTATGATTACAGGCTACCCTATC
GCAATGATGTGGAGAAATGCCTCTAATAGAGCTCAAGGAGCAATATCAGCAAACTTAAGTTTGCTTTACCACAGAAATGT
GGGAGTGCTAGATACGATATTTACTCGAGTTTTATTAGAAGTTACTGGCGCATCTATCGCCCAAATTCTCTTAATGACTA
TATTTATCGCTATTGGTTGGATAGAAATGCCTAACGATATTTTCTATATGCTCTGTGCTTGGATATTAATGGCATTTTTT
GCCTTAGGTTTAGGTTTAATTATCTGTACTTTAGCACATTATATTGAACCTTTTGGTAAGATTTGGGGAACATTCAGCTT
CTTTCTACTTCCTCTTTCTGGTGCATTCTTCTTTGTCCATAATTTACCGCTAACTGCTCAAAATATTGCCTTATGGTTTC
CAATGATTCATGGTACAGAAATGTTTAGACATGGTTATTTTGGTGAAACGGTAATTACCTATGAGAGCATTAGTTATCTT
ATAGTAAGTGATATTATTCTTCTATTTATAGGACTGCTTTGTGTGAGAAGTTTTAGTAAAGGGATAGAACCAAGATGA

Protein sequence :

MRYGDNTTFKRSCVIQKRVIHALLMRELITRYGRKNIGFLWLFIEPLLLTLVITVAWKYIKADKFSTLNIIAFMITGYPI
AMMWRNASNRAQGAISANLSLLYHRNVGVLDTIFTRVLLEVTGASIAQILLMTIFIAIGWIEMPNDIFYMLCAWILMAFF
ALGLGLIICTLAHYIEPFGKIWGTFSFFLLPLSGAFFFVHNLPLTAQNIALWFPMIHGTEMFRHGYFGETVITYESISYL
IVSDIILLFIGLLCVRSFSKGIEPR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ctrC	NP_273137.1	capsule polysaccharide export inner-membrane protein	Not tested	IHT-A	Protein	1e-82	66

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
J451_07895	YP_008222921.1	sugar ABC transporter permease	VFG0685	Protein	6e-92	74
J451_07895	YP_008222921.1	sugar ABC transporter permease	VFG0697	Protein	6e-92	74
J451_07895	YP_008222921.1	sugar ABC transporter permease	VFG0257	Protein	5e-83	66
J451_07895	YP_008222921.1	sugar ABC transporter permease	VFG2564	Protein	4e-51	44