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Name : J451_07885 (J451_07885) Accession : YP_008222919.1 Strain : Mannheimia haemolytica D174 Genome accession: NC_021739 Putative virulence/resistance : Virulence Product : sugar ABC transporter substrate-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1542784 - 1543968 bp Length : 1185 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAACAAAAAAAATTAAATACTACATTATTATTTATAACATTATCATTAATTTCAGCCTGCTCTAGCCTACCAACGTC CGGCCCAAGCTATAGCGAAATCTTAGCAAGTAATGAAAATACAGCTGAAACGCAGTTGCCTGAAGTCAATTTAATCAAGT TAGATAACATCACCGTACAAAACTTATACCAAGAGCAACAATCTCAACGTTTTTCAGGATTTGATGGCTCAATGGGTGTG GGTGGTTATGCTGGAACAGTTAATGTAGGCGATATATTAGAAATATCCATTTGGGAAGCGCCACCTGCCGTGCTATTTGG TGGAACATTTAGTGCTGAAGGGCAAGGTAATGGGCATTTAACCCAATTACCTCAGCAAATGGTGAACAAAAATGGAACGG TAACTGTGCCTTTTATCGGTAATATTAAAGTTGCTGGAAAAACACCTGAAGTAATTCAGAATCAAATTGTCGGAGCATTG AGCCGTAAAGCTAATCAACCTCAAGCATTAGTTCGTATTGCGAATAACTTGTCGTCTGATGTTACGGTTATCCGCCAAGG AAATAGCATTCGTATGCCATTAAGTGCCAATAATGAGCGTATTTTAGATGCAGTTGCGGCAGTAGGTGGTACAAGCGAAA ATATTGAAGATGTAACAGTTCGTTTAACACGTGGAAATAAAGTGCGTTCAATGGCGTTTGAAACATTAATTGCTGACCCC TCACAAAATATTACATTACGTTCAGGTGATGTTATTGCTTTAATGAATACTCCTTATAGCTTTACCGGATTAGGAGCAGT AGGTAATAATCAACAAATGCGTTTTTCAAGTAAAGGCATTACCCTTGCTGAAGCTATCGGTAAAATGGGAGGATTAATTG ATGAGCGTTCAGACCCTCGTGGTGTGTTCGTATTCCGCCATATTCCTTTCACCCAGTTAGACTATACTAGTCAAGCTCAT TGGCGAGAAAAAGGCTATTACGAGGGAATGGACATTCCAACCGTTTATCAGGTAAATTTATTAGAACCACAATCAATTTT TTTATTACAGCGTTTCCCTATTCAAGATAAAGATATTGTGTATGTGTCGAATGCTCCACTGTCTGAATTTCAAAAATTCT TGAGAATGATTTTCTCCATTACAACGCCAATTACAGGTACAGCTAATACAATTAGAGCATACTAA Protein sequence : MKQKKLNTTLLFITLSLISACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITVQNLYQEQQSQRFSGFDGSMGV GGYAGTVNVGDILEISIWEAPPAVLFGGTFSAEGQGNGHLTQLPQQMVNKNGTVTVPFIGNIKVAGKTPEVIQNQIVGAL SRKANQPQALVRIANNLSSDVTVIRQGNSIRMPLSANNERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAFETLIADP SQNITLRSGDVIALMNTPYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGGLIDERSDPRGVFVFRHIPFTQLDYTSQAH WREKGYYEGMDIPTVYQVNLLEPQSIFLLQRFPIQDKDIVYVSNAPLSEFQKFLRMIFSITTPITGTANTIRAY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrA | NP_273135.1 | capsule polysaccharide export outer membrane protein | Not tested | IHT-A | Protein | 4e-96 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| J451_07885 | YP_008222919.1 | sugar ABC transporter substrate-binding protein | VFG0699 | Protein | 1e-141 | 74 |
| J451_07885 | YP_008222919.1 | sugar ABC transporter substrate-binding protein | VFG0687 | Protein | 1e-141 | 74 |
| J451_07885 | YP_008222919.1 | sugar ABC transporter substrate-binding protein | VFG0255 | Protein | 2e-96 | 53 |
