Name : J451_07850 (J451_07850) Accession : YP_008222912.1 Strain : Mannheimia haemolytica D174 Genome accession: NC_021739 Putative virulence/resistance : Virulence Product : capsule polysaccharide transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1531942 - 1534032 bp Length : 2091 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCTTAGCTATTTAGTGTTTTTTAGTAAAATTATAAAAATCCCTAATTTAAAAGGTTTTTTACCTCATTGTGAAATTAG GCGAAGACCTCTTGTGGGAAAAACCTTTATTGCTCAAAAAAGACCGAACCAAATCATCGGCTGGGGGCTTCGTCCTTCAG CGGTGGGAGCAAGAGCTTATGCACAAAAACATCAACTTCCCTATATTGCATTAGAAGACGGCTTTTTACGCTCACTAGGG CTGGGTGTAAAAGGCTATCCGCCATTTTCTTTAGTTTATGATGATATAGGTATTTATTACGATACCACCTGTCCTTCTCG TTTAGAAAAGTTATTGCTTGAAAAACCTTTACAGGATCAAGAGCAAATCAAGCTTGCAGAGAGAGCATTATCTCAAATCT TAACTTACGGACTTTCTAAATATAATCACGCACTAGATTTTAGTGAAATCCCCTCTGCCAAAGAAAAAATCGTGTTAGTT ATTGACCAAACCTTTGGTGATATGGCGGTGAAATATGGTCAAGCGAGTGAAGTGGATTTCAATAAAATGTTGGAAACGGC AATCAGTGAGAATCCAGAGGCTCAAATTTGGGTAAAAACTCACCCCGATGTATTAAGTGGCAAGAAGAAAGGCTATTTGA CCGATTTACCTCAATATACTGATAGGGTCAGAATTATTACTGAAGATGTGAATCCGGCAAGTTTGATTAAATTGTGTGAG AAAGTCTATTGCGTAACTTCGCAAATGGGGTTTGAGGCATTATTATTAGGTAAAAAAGTGGTTACCTTTGGTGTACCGTG GTTTGCCGGTTGGGGGGTAACAGATGATCGTAACGAAGCGGTTCAACTATTAGTTCAACAAAATAGACGGAAAGATCGTT CATTACTGCAACTTTTTTATGCTGCGTATTTTGATTACAGTCGTTATATTAATCCGAATACGGGTGAAAAAGGCTCTATT TTTGATGTGATTGAGTATCTGCACAAGGCGACAATACTCAACCGGCGTTTAAGCGGAAATGTATATTGTATAGGTATGTC ATTATGGAAACAGGCTGTCATTAAGCCGTTTTTTAATTTGCCTCAATGCCGTTTACATTTTGTGCGTTCGCTAAATTCTT TAAAAAAACGACCGCTTGCAGATAATGCAAAAATTTTAGTTTGGAGCAATGGCAAAGCGGATGTCTTGCAATTTGCACAG CAGAATAATATTCCATTGTTAAGAATGGAAGATGGATTCATTCGCTCTGTCGGACTAGGCGCTAATTTAGTTGCACCGCT TTCTTTAGTAGTCGATGATTTAGGCATTTATTTTAATGCAGAGAACACTTCACGATTAGAACAAATTTTATTGAGTGCAG AGCATTTTTCTGAAACTGATTTGTCTTATGCTGAAACATTAAGGCAGAAATTGGTGGCTAGCCATATTGGAAAATATAAT GTGGGCGGTGGCGATGTAAAATTTAATGCTCAAGGTAAAAAAATAATTCTTGTACCGGGGCAGGTAGAAGATGACGCTTC GATCAAATCAGGTTCTCCACAAATTAAAAGAAATCTGGATTTACTGAAAAAAGTGAGGGAATTAAACCCTAGTGCCTATA TTATTTATAAGCCTCACCCTGATGTGGTAAGTGGTAATCGAGTCGGTCAGATTCCTACGGCAGAAACACGCAGGTTTGCG GATCAGATGGTGGATAATGCCAATATTTTAGATTGTATTTTAATTGCAGATGAAGTGCATACAATGACATCTTTAGCCGG TTTCGAAGCATTATTAAGAGGTAAAAAAGTGCATTGCTACGGATTACCTTTTTATGCTGGTTGGGGATTGACGGAAGATA GATTGAAGTCGGCACGCAGAGGTAAATCTTTGACATTATCTCAGTTAATTGCCGCAACATTGATATATTACCCTCTGTAT GTTGATCCTATAAGCAGGCAGTTTATTGATGCCAATCAAGCGATTCATATATTGTCACAACAGAAACGAAACCTAACCAA TCAAAGGATTAAACGTTCTTGGGTGAGTAAACAATATGGAAAATTACAGCATCTTTATCGTGCGTTTAAATATGCTTCCC ACACTAAATAA Protein sequence : MLSYLVFFSKIIKIPNLKGFLPHCEIRRRPLVGKTFIAQKRPNQIIGWGLRPSAVGARAYAQKHQLPYIALEDGFLRSLG LGVKGYPPFSLVYDDIGIYYDTTCPSRLEKLLLEKPLQDQEQIKLAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLV IDQTFGDMAVKYGQASEVDFNKMLETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQYTDRVRIITEDVNPASLIKLCE KVYCVTSQMGFEALLLGKKVVTFGVPWFAGWGVTDDRNEAVQLLVQQNRRKDRSLLQLFYAAYFDYSRYINPNTGEKGSI FDVIEYLHKATILNRRLSGNVYCIGMSLWKQAVIKPFFNLPQCRLHFVRSLNSLKKRPLADNAKILVWSNGKADVLQFAQ QNNIPLLRMEDGFIRSVGLGANLVAPLSLVVDDLGIYFNAENTSRLEQILLSAEHFSETDLSYAETLRQKLVASHIGKYN VGGGDVKFNAQGKKIILVPGQVEDDASIKSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDVVSGNRVGQIPTAETRRFA DQMVDNANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGLPFYAGWGLTEDRLKSARRGKSLTLSQLIAATLIYYPLY VDPISRQFIDANQAIHILSQQKRNLTNQRIKRSWVSKQYGKLQHLYRAFKYASHTK |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 0.0 | 59 |
kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 3e-136 | 49 |
kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 2e-136 | 49 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
J451_07850 | YP_008222912.1 | capsule polysaccharide transporter | VFG0704 | Protein | 9e-180 | 60 |
J451_07850 | YP_008222912.1 | capsule polysaccharide transporter | VFG0692 | Protein | 0.0 | 59 |
J451_07850 | YP_008222912.1 | capsule polysaccharide transporter | VFG0259 | Protein | 0.0 | 59 |