Gene Information

Name : J451_07845 (J451_07845)
Accession : YP_008222911.1
Strain : Mannheimia haemolytica D174
Genome accession: NC_021739
Putative virulence/resistance : Virulence
Product : capsule polysaccharide transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1530687 - 1531919 bp
Length : 1233 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGAACATTATTTAGATGAGCTAATCATCAATAGCCAGAGAATTTTATTGTTACAAGGCCCGATAGGCTCTTTTTTCAC
TGAGTTTGCTCGTTGGTTAGAAAGTGAGCAAAAAGAGGTCTTCAAGTTAAATTTTAATGGCGGAGATGAATATTTCTATC
CAAATAATAGCCCGAATACTTTTCCTTACTATGATAGCTTAGATAATTTTGAAGCCTATTTAATTCAGTTTTGCCAAACT
CATCAAATAGATAATATCTTATGTTTTGGCGATAATCGTTATTATCATAAAGTGGCTAAAAACGTTTGCTTGAAGTTAAA
GTTGGTCTTTTGGGCGTTTGAAGAAGGGTACTTTAGGCCAGAATATATTACGTTGGAAAAATGGGGTGTAAATGCTTTTT
CTCCAATCCCGAAAAATCACACTTTCTTTTTGCCTTATGCCGAGTTACCAGTAGTCAGTGAACCAGAAAAAGTATCTAAA
GGCTTTAGATGTATGGCGGGAAAAGCAATCCCGTACTATTGGAATGCCTATAAAAAACGTAAAGCATACGCAAAATATCA
GCATCATCGTTTTCTGAATCTCAAATACTACCTTAATTTATGGACAAGGTCGGGAATTAAGCGAATATGTTATTGGTTAC
ATGATAAAGGCTTTGCCAAGCGGGTAGAAAAAGGAGAGTTTGGTGAATTTTTCATTGTGCCTCTACAAGTTTATGATGAC
ACTCAAGTGAGGATTCATAGTGAACAAAAAAGTGTAGAGCGTTTTTTAAGGGAAGTTCTGAATTCCTTTGCCAAATTTGC
ACCGGCACATCTCAATTTAATTATTAAGCATCACCCGATGGATAGAGGATTTATAGATTATAAAATGGTGATTTATGAAT
TCTTAGAGCAATATACCCAATTAAACGGTAGAGTTTTTTATATTCACGATGTGCCGTTACCTGTCTTTTTACGTTATGGG
AAAGGAATGGTGACTTTAAATTCAACCAGTGGGCTTTCTGCATTGCTCCATAATATGCCGGTCAAAACCTTAGGTAGAGC
CAATTATGATTTTGAGGGATTAACCGATAAACAGCCATTAGATACTTTTTGGGCTAATCCTCAGCCACCTAATTCGGAAG
TATTTAAAGGCTACAGACAATTTCATTTACATAAAACGCATATTAACGGTAATTTTTACCATAAATCGATTTTGCGTTAT
CCTTATAATTGGGAAAATGAAGCACACAGGTGA

Protein sequence : 
MEHYLDELIINSQRILLLQGPIGSFFTEFARWLESEQKEVFKLNFNGGDEYFYPNNSPNTFPYYDSLDNFEAYLIQFCQT
HQIDNILCFGDNRYYHKVAKNVCLKLKLVFWAFEEGYFRPEYITLEKWGVNAFSPIPKNHTFFLPYAELPVVSEPEKVSK
GFRCMAGKAIPYYWNAYKKRKAYAKYQHHRFLNLKYYLNLWTRSGIKRICYWLHDKGFAKRVEKGEFGEFFIVPLQVYDD
TQVRIHSEQKSVERFLREVLNSFAKFAPAHLNLIIKHHPMDRGFIDYKMVIYEFLEQYTQLNGRVFYIHDVPLPVFLRYG
KGMVTLNSTSGLSALLHNMPVKTLGRANYDFEGLTDKQPLDTFWANPQPPNSEVFKGYRQFHLHKTHINGNFYHKSILRY
PYNWENEAHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipB NP_273146.1 capsule polysaccharide modification protein Not tested IHT-A Protein 3e-93 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
J451_07845 YP_008222911.1 capsule polysaccharide transporter VFG0705 Protein 6e-116 61
J451_07845 YP_008222911.1 capsule polysaccharide transporter VFG0693 Protein 6e-116 61
J451_07845 YP_008222911.1 capsule polysaccharide transporter VFG0260 Protein 1e-93 53