|
Name : J451_07695 (J451_07695) Accession : YP_008222886.1 Strain : Mannheimia haemolytica D174 Genome accession: NC_021739 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : - COG ID : - EC number : - Position : 1496726 - 1499323 bp Length : 2598 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGACACAAGATTTCTCCACCCATACGCCAATGATGCAACAATATTTGCAACTCAAAGCTCAAAATCCGGACATACTATT GTTTTACCGAATGGGGGATTTTTATGAGCTGTTTTATGATGATGCGAAACGAGCGGCAGCATTGTTGGATATTTCGCTCA CCAAGCGAGGGCAATCTGCCGGTGAGCCGATTCCGATGGCGGGTGTGCCTTATCACGCAGTGGAGGGGTATTTGGCGAAA TTGGTGGCGTTGGGGGAATCGGTAGCAATTTGTGAACAGATTGGCGACCCAGCAACCTCAAAAGGGCCGGTAGAACGCAA AGTGGTACGGATTGTTACGCCGGGAACAGTTAGCGATGAGGCATTGTTACCCGAACGCCAAGATAACTTGGTGGCGGCAG TTTACGAAGAAAAAGGCACATTTGCGATTGCTACGCTAGATATGACCTCCGGGCGGTTTTTAATCAGTGAACTTGCTAGC AAAGAGGCTCTATCCGCCGAGTTACAACGTGTACAACCGGCAGAAATTCTGTATGCGGAAGATTTTTCCGCTGCCTCAAT TTTAACGAATTACAAAGGGTTACGCCGCCGTCCGGTGTGGGAATTTGAGCTGGTAACGGCGATTCAGCTGCTAAATCGCC AATTCGGCACGCAAACACTTGCCGGATTTGGGGTGGAAAAAGCGGTGGTGGCACTTTGTGCTGCCGGCTGTGTCTTGCAT TATGCCCAAGAAACGCAACGCACCGCTTTACCGCACATTAACGCAATTCATTTGGCACAACATAGCGATACTATTTTGCT CGATGCAGCTACTCGTCGCAATTTAGAGCTGACCCAAAACTTAGCGGGTGGCACGGAAAACACGCTGGCGGCGGTGTTAG ATAAATGTGTGACCCCAATGGGGAGCCGTCTGCTCAAGCGTTGGATTCATCAGCCGATTCGAGATTGTGGTAAATTACAA GCCCGACAAAAGGCGATAACAGCATTGATACAATATGAGCGAATGTCGGATTTACAGCCGTTATTACAACAAGTCGGCGA TATGGAGCGGATTCTCGCCCGAGTGGCGTTGCGTACGGCTCGCCCTCGTGACCTCACCCGACTACGCACTGCATTGGCTC AGTTACCGGAAATTGCAAAAAATTCACAAAATCTGACCGCTAGTATCGATCAGCTTTTGGCTCAACTGGCGGATTTCAGC CCGTTACACGATTTGCTGGAGCGGGCGATTATCGAAAACCCACCACAACTCATTCGTGATGGTGGGGTGATTGCAGAAGG TTATAATGCCGAGCTTGACGAATGGCGGCAACTTTCGGACGGGGCAACGCAATATCTGGAAAATTTGGAGATCAGAGAAC GTGAAAGCACCGGCATTGATTCGCTGAAAATCGGCTTTAATGCGGTTCACGGCTATTACATTCAGATCAGCCAAGGGCAA GCACACAAAGCCCCGATTCACTATGTTCGCCGCCAAACGCTCAAAAATGCGGAGCGGTATATTATCCCTGAGCTGAAAAC TTACGAAGACAAAGTGCTGAAAGCAAAAGGGGCATCGCTTGCCCTTGAAAAACAGCTTTATGATGAACTGTTTGATGTGT TAATGCCTCGCTTAGGCGAATTGCAATTAGCGGCGATGATGCTGTCTGAACTTGATGTCTTAACCAACCTTGCCGAGCGA GCTGATAGTTTAGGCTATGTTTGCCCGAGCTTTAGCCCGATGCGAATGGTGAATATTAAAGGCGGCAGACACCCGGTGGT GGAGCAGGTTTTAACCGAGCCGTTTATTGCCAATCCGGTGTTTTTAAATTCCCAACGGCATTTATTGATTGTGACCGGCC CGAATATGGGCGGTAAAAGCACCTATATGCGGCAAATTGCCCTCATTACATTGATGGCGTATATCGGCAGTTTTGTGCCG GCAGAAAGTGCGGAAATCGGCCCGATTGACCGTATTTTCACCCGAATTGGGGCAAGCGATGATTTAGCTTCAGGGCGTTC AACCTTTATGGTGGAAATGACCGAAATGGCGAATATTCTGCATCAAGCCACCGAAAACAGCCTTGTGCTGATTGATGAAA TCGGGCGAGGCACTTCTACCTATGACGGCTTATCACTGGCGTGGGCGTGTGCCGAATGGCTGGCGAAGAAAACCCAGTCA CTCACTTTGTTTGCAACCCACTATTTTGAACTTACCGGCTTGCCGAATCAGCTCAAAGGGGTGGCAAATGTGCATTTAGA CGCGCGTGAACATCAAGACAGTATTGTGTTTATGCACTCGGTGCAAGAGGGGGCCGCCAGCAAAAGTTACGGCTTGGCGG TGGCAGCCTTGGCGGGTGTGCCAAAGCAAGTGATTCAACTGGCAAAGCAGCGTTTGGCACATTTGGAGGAAATTTCCCAC CAAACCAAACAAGCAAACGAACATCCACAGGCGGATTTGTTGTTTTCCGATGGTTTTGATTTGCAAAAAAATGAAGCAAT TCAACCGCTTGTAGTAGAAAATGAAGTTGAAAAAGCCCTGAAAGCCCTTCAGCCTGATGAACTTACCCCAAGACAGGCTT TGGACGAGTTGTATCGCTTGAAAAAATTGTTGGGGTAA Protein sequence : MTQDFSTHTPMMQQYLQLKAQNPDILLFYRMGDFYELFYDDAKRAAALLDISLTKRGQSAGEPIPMAGVPYHAVEGYLAK LVALGESVAICEQIGDPATSKGPVERKVVRIVTPGTVSDEALLPERQDNLVAAVYEEKGTFAIATLDMTSGRFLISELAS KEALSAELQRVQPAEILYAEDFSAASILTNYKGLRRRPVWEFELVTAIQLLNRQFGTQTLAGFGVEKAVVALCAAGCVLH YAQETQRTALPHINAIHLAQHSDTILLDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDCGKLQ ARQKAITALIQYERMSDLQPLLQQVGDMERILARVALRTARPRDLTRLRTALAQLPEIAKNSQNLTASIDQLLAQLADFS PLHDLLERAIIENPPQLIRDGGVIAEGYNAELDEWRQLSDGATQYLENLEIRERESTGIDSLKIGFNAVHGYYIQISQGQ AHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDELFDVLMPRLGELQLAAMMLSELDVLTNLAER ADSLGYVCPSFSPMRMVNIKGGRHPVVEQVLTEPFIANPVFLNSQRHLLIVTGPNMGGKSTYMRQIALITLMAYIGSFVP AESAEIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATENSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKTQS LTLFATHYFELTGLPNQLKGVANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAALAGVPKQVIQLAKQRLAHLEEISH QTKQANEHPQADLLFSDGFDLQKNEAIQPLVVENEVEKALKALQPDELTPRQALDELYRLKKLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| J451_07695 | YP_008222886.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 69 |
