|
Name : sgbE (J451_07290) Accession : YP_008222813.1 Strain : Mannheimia haemolytica D174 Genome accession: NC_021739 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.4 Position : 1418649 - 1419368 bp Length : 720 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGACGCAATTAACTGAATTAACCCCTGCATTACAAGCCTTAAGAGAGCGTGTGTTAAAAGCCAATTTAGAATTACCGAA GTATGGCTTGGTAACTTTCACTTGGGGTAACGTAAGTGAAATCGACCGTGAGACCGGTTTAGTCGCCATCAAACCTTCCG GCGTAGAATACGATGCGATGACGGTGGAAGACATTGTATTGGTTGATTTACAAGGTAATCGAGTTTACGGAGATAAAAAA CCGTCTTCTGATACAGAAACGCACTTAGAACTTTATCGCCAATTCACTGATATTGGCGGTGTGGTACACACTCACTCTCG CAATGCTGTAGGTTGGGCACAAGCAGGGCGTGATTTATTGGCACTTGGCACCACTCAAGGCGATTATTTCTACGGTGCGA TTCCTTGTACTCGCAAAATGACCGCAGAGGAAATTGCCGGCAGTTATGAGCTGGAAACCGGAAAGGTGATTGTCGAAACT TTCCGAACTCGAGGTATTGAACCGAAAGCAGTTCCAGGTGTGTTGGTACATTCACACGGTCCATTTACCTGGGGAAAAGA TGGACACGATGCTGTGCATAATTCTGTGGTATTAGAAGAGGTGGCTTACATGAATTTTATTAGCCATCAAATTCGCCCAC AAATTGGCCCAATGCAACAGGAATTATTAGATAAGCATTATCTGCGTAAGCATGGTGCAAATGCTTATTATGGGCAATAG Protein sequence : MTQLTELTPALQALRERVLKANLELPKYGLVTFTWGNVSEIDRETGLVAIKPSGVEYDAMTVEDIVLVDLQGNRVYGDKK PSSDTETHLELYRQFTDIGGVVHTHSRNAVGWAQAGRDLLALGTTQGDYFYGAIPCTRKMTAEEIAGSYELETGKVIVET FRTRGIEPKAVPGVLVHSHGPFTWGKDGHDAVHNSVVLEEVAYMNFISHQIRPQIGPMQQELLDKHYLRKHGANAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 2e-66 | 60 |
