Gene Information

Name : J451_06835 (J451_06835)
Accession : YP_008222731.1
Strain : Mannheimia haemolytica D174
Genome accession: NC_021739
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1318177 - 1319049 bp
Length : 873 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: GeneMa

DNA sequence :
ATGACTAATCGCTATGATTTAAACAGACAACTTGCTCAAATGTTAAAAGGCGGTGTAATTATGGATGTAACTACCCCTGA
GCAAGCCTGCATTGCGGAAGAAGCTGGAGCTTGTGCAGTAATGGCACTAGAGAGAATTCCTGCAGATATTCGTGCAGCTG
GTGGCGTTTCTCGTATGAGTGATCCCAAGATGATAAAGAGTATCCAAGCAGCGGTATCCATTCCTGTAATGGCGAAAGTA
CGTATTGGACACGTTACAGAAGCACAAATCCTGCAAGCGATCGAAATTGACTATATTGACGAAAGTGAGGTGCTTTCTCC
TGCAGATGATACCTTCCACATTAACAAGCGTAAATTTGAAGTGCCATTTGTATGTGGAGCAAAAAATTTAGGCGAAGCCC
TACGTCGTATTAATGAAGGCGCTGCTATGATCCGTAGTAAGGGCGAGCCAGGAACAGGCAATGTGGTGCAAGCAGTACAT
CATCTTCGCAAAATGAAACAAGAAATTGCCCGCTTGGTTTCACATACCACAGATGAACTTTATCACGTAGCTAAAGAGCT
CCAAGTACCATTTGATTTAGTACAATATGTACATCAGTACCAAAAATTGCCTGTTGTCACCTTTGCTGCTGGAGGTGTTG
CAACCCCTGCCGATGCTGCATTGATGATGCAGTTAGGTGCAGAAGGAGTCTTCGTTGGCTCAGGTATTTTCAAGTCAGGC
GATCCTGCTAAACGAGCGCGGGCCATTGTACAAGCTGTTACCAACTACAACGATCCTAAATTACTTGCGGAGCTTTCTGA
AGATTTAGGTGAAGCAATGGTAGGAATTAATGAGCAAGAGATTGAATTGCTAATGGCAGCAAGAGGTGTCTAA

Protein sequence :
MTNRYDLNRQLAQMLKGGVIMDVTTPEQACIAEEAGACAVMALERIPADIRAAGGVSRMSDPKMIKSIQAAVSIPVMAKV
RIGHVTEAQILQAIEIDYIDESEVLSPADDTFHINKRKFEVPFVCGAKNLGEALRRINEGAAMIRSKGEPGTGNVVQAVH
HLRKMKQEIARLVSHTTDELYHVAKELQVPFDLVQYVHQYQKLPVVTFAAGGVATPADAALMMQLGAEGVFVGSGIFKSG
DPAKRARAIVQAVTNYNDPKLLAELSEDLGEAMVGINEQEIELLMAARGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-82 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-82 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-82 70