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Name : potB (J450_03800) Accession : YP_008219813.1 Strain : Mannheimia haemolytica D171 Genome accession: NC_021738 Putative virulence/resistance : Unknown Product : putrescine/spermidine ABC transporter permease Function : - COG functional category : - COG ID : - EC number : - Position : 839230 - 840093 bp Length : 864 bp Strand : + Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAGGCGAATAACAAATTCCAAAATGGTGCGGTCGCAACTATTTTCGGTTGGTTATTACTTTTCGTATTAGTGCCGAA CGTACTCGTTTTAATCATCAGCTTCTTAACAGAAAACCGTCAAAGTCAGTATTTTGTGGACTTTGCATTTAGTTTTGATG CTTATAAATCACTGTTTAATGACACCTATGCAGCAGTATTGTGGAACTCGCTATATATGGCGGGCATTGCCACCTTTTTC TGTTTGATCATCGGCTATCCCTTTGCATTTTTTATTGCCAAAATGCCGGAAAGAATTCGTCCGTTTTTACTGTTTTTAGT AGTTCTACCGTTTTGGACTAACTCACTGATTCGTATTTATGGCATTAAGATTTTCTTAGGCGTAAAAGGCTTTTTAAATG AAAGCTTGATGGCTTTAGGTATCATCAGCGAGCCAATGCGTTTATTAAACTCAGAAATTGCGATTATTATTGGTTTAGTT TACATTCTATTACCTTTTATGATTCTACCGCTTTATTCATCAATCGAGAAAATTGATAACCGCTTACTAGAAGCTGCAAA AGACTTAGGTGCAAACGCCTTCCAGCGTTTTATTAAAGTGACTATTCCATTAACAATGCCGGGCATTGTCGCAGGTTGTT TATTAGTATTACTTCCGGCAATGGGTATGTTCTATGTGGCAGATTTATTAGGCGGCGGTAAAACACCGTTAGTAGGTAAC ATTATTAAGAGCTTGTTCTTAAATACCAACCAATTTGCATTAGGTTCAGCAGTAAGTATTGCATTAACTATCTTAATGGC ATTAATGCTTTATGTTTACTATCGTGCAAACAAATTATTAAATAAAAAGGTGGAGCTTGAATAA Protein sequence : MKANNKFQNGAVATIFGWLLLFVLVPNVLVLIISFLTENRQSQYFVDFAFSFDAYKSLFNDTYAAVLWNSLYMAGIATFF CLIIGYPFAFFIAKMPERIRPFLLFLVVLPFWTNSLIRIYGIKIFLGVKGFLNESLMALGIISEPMRLLNSEIAIIIGLV YILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPLTMPGIVAGCLLVLLPAMGMFYVADLLGGGKTPLVGN IIKSLFLNTNQFALGSAVSIALTILMALMLYVYYRANKLLNKKVELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 6e-68 | 60 |
