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Name : J450_02390 (J450_02390) Accession : YP_008219540.1 Strain : Mannheimia haemolytica D171 Genome accession: NC_021738 Putative virulence/resistance : Unknown Product : type I restriction endonuclease HindVIIP subunit R Function : - COG functional category : - COG ID : - EC number : - Position : 530594 - 533752 bp Length : 3159 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCTAGGCATCAACGAAAACACCATTGAACAATCCGCCATTGCGACTTTGCAAGGCTTGGGCTGGGACTACACCTACGG CAAAACGATTTTGGCAGGTTTAGAACACGAATGGCGGGAGCGAGCCACTGAGGTGGTATTAAAGCCGCTGCTTGCCGAAG CGATTGCAAAATTCAACCCGAATTTGCCCGCTTGTGAGGTGGAAAATGTGGTGGCACAGGTGTGCCGTGCGGAAAGTAGT GATTTGGCGGAGCGTAATCGTCAGGCTTATGATTGGCTAAGAAATGGGGTCAAAATCACTTATCAGTTGGACGGTGAGCA GGTGTCTGATGTGGTGCAGCTGATTGATTTTCAGCGTCCAGAAAATAACGATTTTCGCATTGTCAATCAGCTGGATATTG GCGGTAAAAAAGGCAAACGCATTCCTGATTTGATTGGCTTTGTCAATGGCTTGTCGCTGGTGGTATTTGAGCTGAAAAAT CCGCTCAAAGAAAATGCCGACATCGGCAAGGCGTTTGCCCAACTGCAAACCTATAAAGATGAAATTTCTGATTTGTTTGT GTTTAATCAGGCACTCGTGATTTCAGACAGCATTGTCGCCCGTATCGGTTCGCTGACCGCCGATTTCGACCGTTTTACCC CTTGGCGTGTGGTTGATGAAAAAAATCAGAACAAACGCATTGTGTTTGAAGATGAACTCACCGCCCTACTGCAAGGCGTG ATGAACCCCAAAAATCTACTGGATTATGTGCAGAATTTTGTGGTGTTTGAACGGGACGGCAAAAACCGTTTGATTAAGAA AATCGGGGCGTATCATCAGTTTTATGGCGTGAATGAAGCGGTGGATTGCACCTTGCTTGCCACCACAGGCAACCGCAAAA TCGGTGTGTTTTGGCATACGCAAGGCTCGGGCAAATCGCTTTCGATGCTGTTTTATGCAGGTAAAGTATTAAGCCAAGGC TGCCTGAAAAATCCAACTTTGGTGTTAGTCACCGAACGCAACGATTTAGACGGTCAGCTTTACGCCACTTTTTGCGGTGG TGAGGCATTGCTCAAACAAACGCCTATCCAAGCCGATGGGCGAGACGAACTCCGCTCTGCCCTTGCCAGTCGTTCAGCAG GCGGTGTAATTTTTACCACCATTCAAAAATTTGGCTTAATGGAGGGCGAGCTTGCCCACCCAGTGTTAAACGAGCGGGAA AACATCATTGTGATTACCGATGAAGCACACCGTTCGCAATATGGTTTTAGCCAAAAAATCAACCACAAAGGCGAGTATCG TGAGGGTTACGCCAAGCATTTACGCAGTGCATTGCCGAATGCTTCTTTTATTGGTTTTACAGGCACGCCGATTGAACTTG ATGACAAAGACACCCAAGAAGTCTTCGGTAAATATGTCTCGATTTATGATTTTGAAGATGCGGTGGAAGATGGGGCAACC GTGCCGATTATTTATGAGCCACGCCAAATCAGCTTAGGCGAAAGTGGCGAGTTTACCAAAGTGATGGAAGAGGCACAACA ACTGATTGATGACGATGAAAACAGCTATAACTTCCGCCTGCGTGAAAAACTGCACAGCGTGGATAGCCGTTTGCAAAAAA TGGCGGAAGATATTATTGCCCATTACGATGAGCGTACCAAACAGCAAGACGGCAAGGCGATGGTTGTGGTGATGAGCCGT GCCATTTGCGTGAAATTGTACGAAAAAATCACCGCACTTCGTCCAGAATGGCACTCAAACGATGTGCTTCAAGGCAGCAT TAAAATTGTGATGACAAGTAATGCCAGCGACCCTGCCGAGTGGCAAAAACACAATCAGGATAAGAAAACCTTAGAAAAAC GCTTTAAAGACCCAGACGATCCGCTCAACATCGTGATTGTGCGGGATATGTGGCTGACAGGCTTTGATGCGCCCTGCTGT AACACAATGTACATTGATAAACCAATGAGCGGACACAACCTGATGCAGGCAATCGCTCGGGTAAATCGGGTATTTCGCAA CAAAAGCCGTGAAAATGGCGGCTTGATTGTGGATTATGTGGGCTTGACCGATGAGCTGGAAAAAGCGATGAAGCAGTACA CCAACGCAGGCGGCAAAGAAAAGCCGGTGCGGGACATTTCAGCGGTGCTGGAAAAAATGGTGGAACATATCACGGTCATT CGTGGGCAATTTGCCACACCGATTGACGGACAAGCGGTTGATATTGCCAAAATGTTGCAAATCAGCGAACCGCCTAAACT GCTCAATGCGATTTTGACATCAGCCAACCATATTCTTGCCCTAGACCGCATTCAGCCACCTGATAACACTGCCAAAGACA AAACCCCACGCAAAAACGCCTTTTTGCAATCGGTACGCTTGGCGAAAAAAGGTTATGCTTTGTGTGGGGCATTAAAAGCA GTTGAACCCTATAAACAGGAACTGGCGTTTTATGATGCAGTGCGTGCCACCATTATCAAAAACAGCACCGCTCCTCGCAA TTCTTCGAGCGAAAATGACCGCTTGTTGCAGCTTACCGCCTTGATGAATCGTGCGGTACAGTCGGATGGTGTGGTGGATT TATTTGATTTGCTGAAAAAAGACCGCCCAAACATCAACCTGCTTTCTGATGAGTTTTTGGAAACAGTAAAAAACAGCCCA ACCAAAGATTTGTGGCTATCAGCAATGGAGCGTTATCTTGCCTCACAACTGCGAGAGCAAAGCGGTGCCAATCTTGCCAC AAAAAAAGCATTTGAACAGAAACTCAAAGAGGCGATGAACCAATACCACAACCACAATTTAAGCGTATTGGAAATTTTAG AAGAGCTGATCGCCCTCGCCAAAGAGTTTGAAGCCCGCCAAAAACGAGGGGAAGCGTTGGGACTAAGCCCTGCGGAAATG GCGTTTTATGATGCTTTGGCACGTAATGAAAGTGCGGTGCGGGAAATGGGCGATGAGGTATTGATGAAACTTGCCAAAGA CATTACCGATAAATTACGCAAATCGGTCACCGTAGATTGGCAATATAAAGACTCGGTTCGTGCCAAAATGCGAACCTTAA TCCGCATTGCTCTGCGTACCTATAAATACCCGCCCGATTTACAGGCGGAAGCGATTGAGTTTGTGTTGCAACAAGCGGAA GAGATCGCCGGAGAGTTCGCTATCACCGAAACGGCGTAA Protein sequence : MLGINENTIEQSAIATLQGLGWDYTYGKTILAGLEHEWRERATEVVLKPLLAEAIAKFNPNLPACEVENVVAQVCRAESS DLAERNRQAYDWLRNGVKITYQLDGEQVSDVVQLIDFQRPENNDFRIVNQLDIGGKKGKRIPDLIGFVNGLSLVVFELKN PLKENADIGKAFAQLQTYKDEISDLFVFNQALVISDSIVARIGSLTADFDRFTPWRVVDEKNQNKRIVFEDELTALLQGV MNPKNLLDYVQNFVVFERDGKNRLIKKIGAYHQFYGVNEAVDCTLLATTGNRKIGVFWHTQGSGKSLSMLFYAGKVLSQG CLKNPTLVLVTERNDLDGQLYATFCGGEALLKQTPIQADGRDELRSALASRSAGGVIFTTIQKFGLMEGELAHPVLNERE NIIVITDEAHRSQYGFSQKINHKGEYREGYAKHLRSALPNASFIGFTGTPIELDDKDTQEVFGKYVSIYDFEDAVEDGAT VPIIYEPRQISLGESGEFTKVMEEAQQLIDDDENSYNFRLREKLHSVDSRLQKMAEDIIAHYDERTKQQDGKAMVVVMSR AICVKLYEKITALRPEWHSNDVLQGSIKIVMTSNASDPAEWQKHNQDKKTLEKRFKDPDDPLNIVIVRDMWLTGFDAPCC NTMYIDKPMSGHNLMQAIARVNRVFRNKSRENGGLIVDYVGLTDELEKAMKQYTNAGGKEKPVRDISAVLEKMVEHITVI RGQFATPIDGQAVDIAKMLQISEPPKLLNAILTSANHILALDRIQPPDNTAKDKTPRKNAFLQSVRLAKKGYALCGALKA VEPYKQELAFYDAVRATIIKNSTAPRNSSSENDRLLQLTALMNRAVQSDGVVDLFDLLKKDRPNINLLSDEFLETVKNSP TKDLWLSAMERYLASQLREQSGANLATKKAFEQKLKEAMNQYHNHNLSVLEILEELIALAKEFEARQKRGEALGLSPAEM AFYDALARNESAVREMGDEVLMKLAKDITDKLRKSVTVDWQYKDSVRAKMRTLIRIALRTYKYPPDLQAEAIEFVLQQAE EIAGEFAITETA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 48 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 41 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 41 |
