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Name : J450_02370 (J450_02370) Accession : YP_008219536.1 Strain : Mannheimia haemolytica D171 Genome accession: NC_021738 Putative virulence/resistance : Unknown Product : type I restriction endonuclease HindVIIP subunit M Function : - COG functional category : - COG ID : - EC number : - Position : 526349 - 528007 bp Length : 1659 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCCAAATAACACTGCACGACCTGCTCTTGACAATACGGTCAGTCAAGCCTTTTTAAACGATCTCGACCAAACCCTCTG GACAGCCGCCGACAAGCTGCGTAAAAACCTCGATGCCGCCAACTACAAACACATCGTTCTTGGCTTTATCTTCCTAAAAT ACATCTCCGACAGCTTTACCGATTTCCAAGCCAAGCTAAAAACCCAGCTTACCACCCCCGAAAGCGAACTCTATCTTGAC CCTGCACTATTTGACGAACAAGAATTTAGCCAAATTCTTGCCGAAGAGTTGGAACAGAGAGATTACTACGCTGCCGAAAA CATCTTTTGGGTGCCGGAGCAAGCCCGCTGGGACAACATCAAATCATTAAGCAAACTCAATCTTGGCGATGAATTGCCTT GGGGAGACAAATTTAAAGGTGTCAGCCGCTTGATTGATGATGCCTTTGAAGCCATCGAACGGGAAAACCCCAAACTCAAA GGCGTACTCCAACGCATTGCCGGCTTTGGCGTGCCTGATGAAATGCTCACAGGCTTAATTGACCTGTTCTCACGCACCAA TTTCACCCAGCCTATGCACAATGGCGAACCTGTGCATCTGCAAGCCAAAGACATTTTAGGGCACGTCTATGAATACTTTC TTGGACAATTTGCCCTAGCTGAAGGCAAAAAAGGCGGTCAATACTTCACGCCCAAATCCATTGTTACCCTGATTGTTGAA ATGCTCAAACCCTATTCAGGGCGGATTTATGACCCTGCAATGGGCAGCGGCGGATTTTTTGTGCAGGCTGACCGCTTTAT TCCGGCACATCAAGGCAACCGCAACGCCATTTCGGTTTATGGGCAAGAATCCAACCCCAACACCCGCAAACTGGCGGTGA TGAATATGGCGATTCGTGGCATTCCCTTTGACTTTGGCGACAAGCCCGAAGATACCCTACTAAACCCTTTGCACATCGAC AAAAAAATGGATGTTGTGATGGCAAATCCCCCCTTTAACCAAAAAGCGTGGTGGAGTGAAAGCCTAGCAAACGACCCACG CTGGGCATACGGCACACCGCCGCAAGGCAACGCCAACTTTGCGTGGCTGCAACATATGATTTACCACCTCTCCCCCAAAG GCAAAATGGCACTCCTGCTCGCCAACGGCTCAATGAGTAGCCAAACCTCAGGCGAAGGCGACATTCGCAAAAACATCGTG CAAGCCGACCTTGTCGAAGCGATGATTGCCCTGCCCAATCAGCTATTCACCAACACCCAAATCCCTGCCTGCATTTGGAT TATCAATAAAGCCAAAGCCAGAAAAAAAGAGGTGCTGTTTATCAACGCTACCCAAATCGGCTATATGAAAGACCGTGTCT TGCGTGATTTTACCGCTGATGACATTGCCAAAATCAGCGACACCTACCACAACTGGCAAAAACAGGACGGCTACGAAAAT ATCCCTGCGTTTTGTTATTGTGCCACGCTGGACGAAATCGCCAAAAATGACTTTGTGCTAACGGCTGGGCGATATGTAGG AGCGGCAGTCGAAGAAGATGACGGCGTACCGTTTGCTCAAAAAATGCAAGAACTAACCGCACTTTTAAATGAACAATTTA GACAAGGGCGAGCATTGGAAGAAAAGATTGTGGCAAATTTAAAAGGGTTGGGGTTTTAA Protein sequence : MPNNTARPALDNTVSQAFLNDLDQTLWTAADKLRKNLDAANYKHIVLGFIFLKYISDSFTDFQAKLKTQLTTPESELYLD PALFDEQEFSQILAEELEQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLK GVLQRIAGFGVPDEMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIVE MLKPYSGRIYDPAMGSGGFFVQADRFIPAHQGNRNAISVYGQESNPNTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHID KKMDVVMANPPFNQKAWWSESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIV QADLVEAMIALPNQLFTNTQIPACIWIINKAKARKKEVLFINATQIGYMKDRVLRDFTADDIAKISDTYHNWQKQDGYEN IPAFCYCATLDEIAKNDFVLTAGRYVGAAVEEDDGVPFAQKMQELTALLNEQFRQGRALEEKIVANLKGLGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-166 | 60 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 3e-114 | 46 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 2e-112 | 46 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 2e-113 | 45 |
