Gene Information

Name : J450_00215 (J450_00215)
Accession : YP_008219111.1
Strain : Mannheimia haemolytica D171
Genome accession: NC_021738
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 54173 - 54931 bp
Length : 759 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGATAACGGTTAAAAATCTTCACCACAAAATCGGGAATGCCACGATTCTGAATAATATCAATTTAACCATTCCAAATGG
TGGTATTACCGCTTTAATCGGAGCAAATGGTGCGGGCAAATCCACCCTGCTCTCTTTAATTGCACGCTTGCAACCTATCC
AACAGGGTGAAATCCACTTAAATGAGCTGAATACAGCCAACACAGCTTCTCAAACTATCGCTCGACAACTGGCTATCTTG
ACCCAAGATAATGTGATTCATAGCCGTATTACCGTCAAAGATCTGCTGTTATTTGGGCGTTACCCTCATCATCAAGGCAG
AATCACTTCGCACGATAATGCCATTGTAGAAGAGGCTCTGGTACGATTTGATTTATCGACTTTCTCCCACCGATTCTTAA
ATGAATTATCCGGAGGGCAACGCCAGCGGGCATTAATTGCAATGACCTTCTGTCAGCAAACCGATCATATCTTATTAGAT
GAACCACTGAATAATTTAGATATGTTCCATGCTCGGGAATTAATGAAATTATTACGAAAATTAACCGATGAACTCGCCTT
AACTACTATAATGGTGGTACACGACATCAACATTGCTGCTGCTTACGCAGATACTATTATTGCAATGAAAGATGGTGGAA
TTAAGATGATCGGCACCCCAAAAGAGATTATCACCACTGAAAATTTAAAAACAGTGTTTAATCTTGATGCCGAAGTGTTA
GAATGCCAAGGCAAACCTTTAGTTATTCATCATATTTAA

Protein sequence : 
MITVKNLHHKIGNATILNNINLTIPNGGITALIGANGAGKSTLLSLIARLQPIQQGEIHLNELNTANTASQTIARQLAIL
TQDNVIHSRITVKDLLLFGRYPHHQGRITSHDNAIVEEALVRFDLSTFSHRFLNELSGGQRQRALIAMTFCQQTDHILLD
EPLNNLDMFHARELMKLLRKLTDELALTTIMVVHDINIAAAYADTIIAMKDGGIKMIGTPKEIITTENLKTVFNLDAEVL
ECQGKPLVIHHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-32 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-32 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-32 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-32 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
J450_00215 YP_008219111.1 ABC transporter ATP-binding protein BAC0164 Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
J450_00215 YP_008219111.1 ABC transporter ATP-binding protein VFG1042 Protein 2e-30 41