|
Name : J450_11595 (J450_11595) Accession : YP_008221304.1 Strain : Mannheimia haemolytica D171 Genome accession: NC_021738 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2395025 - 2396332 bp Length : 1308 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGATCGACCAAAACCTACTTCGTACCAATTTAGAAGACGTTGCTACAGCTCTTAAAATCAAACGTAATTTTATTTTAGA TGTAGAGCGAGTAAAAACCCTTGAAGAACAGCGTAAAACGCTACAAGTTAAAACCGAAACCTTACAAGCAGAACGCAACA CTCGCTCCAAAAACATCGGTGCGGCAAAAGCTCGTGGCGAAGATATTTCAGCTTTATTAGCCGAAGTAGATTCAATGGGC AACGAATTAGACACGGCAAAAGTAGAATTGGATAAAGTACAGGCAGAAATCCGTGAGTTGTTGCTTTCTGTGCCAAACTT ACCGGCAGATGAAGTACCACTCGGTAAAGACGATAGCGAAAACTTAGAAGTATTACGTTGGGGCGAACCACGTCAATTCG ACTTTGAAGTTCAAGATCACGTTACCCTTGGCGAAAACTTAAACGGTTTAGATTTTGCTGCCGGTGTAAAATTAACCGCC AGCCGTTTTGTGGTAATGAAAGGTAAACTTGCCCGCTTACACCGTGCATTATCTCAATTTATGTTGGATTTACACACTGA ACAACACGGCTATGTGGAAACCAATGTGCCATTTTTAGTCAATCACGACACTCTATACGGCACAGGTCAGCTACCAAAAT TTGGCGAAGATTTATTCCATACTCAACCATTAACAGGGCAAGATCCAAACGAGGTGCAACGCCCATTCGGTTTGATTCCA ACCGCTGAAGTGCCAGTAACGAACTTAGTGCGAGATGAAATCATTGATGAAGACAGCTTACCACTGCGTTATACCGCCCA CACCCCTTGTTTCCGTGCGGAAGCCGGTTCTTATGGGCGTGATACTCGTGGTTTAATTCGTATGCACCAATTTGAAAAAG TGGAAATGGTGCAAATTGTCGCCCCTGAAAAATCAATGGAAGCCTTAGAAGAATTAACCGGTCACGCAGAAAAAGTCTTA CAGCTTTTAGGCTTGCCATACCGCAAAGTGCTACTCTGCACTGGTGATATGGGCTTTGGTGCAGCAAAAACCTACGACTT AGAAGTTTGGCTACCGGCACAAAACACTTACCGTGAGATTTCTTCTTGCTCAAATATGTGGGATTTCCAAGCCCGCCGAA TGTCTGCACGTTGTAAAGCTAAAGGCGACAAGAAAACTCGCTTGGTTCACACCTTAAACGGCTCAGGTTTAGCGGTTGGT CGCACACTGGTCGCTGTGTTAGAAAACTACCAAAATGCCGATGGCTCTATTACTGTGCCTGAGGTGTTAAGACCTTATAT GGGTGGTTTGGAAGTAATTACCGCTTAA Protein sequence : MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVKTETLQAERNTRSKNIGAAKARGEDISALLAEVDSMG NELDTAKVELDKVQAEIRELLLSVPNLPADEVPLGKDDSENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTA SRFVVMKGKLARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPNEVQRPFGLIP TAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAGSYGRDTRGLIRMHQFEKVEMVQIVAPEKSMEALEELTGHAEKVL QLLGLPYRKVLLCTGDMGFGAAKTYDLEVWLPAQNTYREISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVG RTLVAVLENYQNADGSITVPEVLRPYMGGLEVITA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-105 | 54 |
