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Name : gabD (J450_08095) Accession : YP_008220616.1 Strain : Mannheimia haemolytica D171 Genome accession: NC_021738 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 1676085 - 1677536 bp Length : 1452 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCCAAATCACAAATTTTTGCTACTCCGTTTCCAAGCCTATATTAACGGTAAATTTGTTTCAAGCCAAAATGGGAAAAC CTTTACGGTACAGAATCCGACTAATGGTGAGAAAATCGGTGAGGTGGCTGATTTAGGCACGGAAGAAACCGCTCAAGCGA TTGAAGCAGCCGCAGTTGCCCAGAAAAAATGGCAGGCATTATTGCCCAAAGAGCGTTCCGTGATTTTGCGTAAATGGTTT GAGCTGATTATGCAAAACCAAGAAGAACTCGCCCAGATTTTAAGTCTAGAACAGGGTAAACCATTGGCAGAAAGTCGAGG CGAGATTGCCTATGGAGCCAGTTTTATCGAGTGGTTTGCCGAAGAAAGCAAGCGGATTTATGGCGATGTCTTGCCACAAG ATAAAGCCGGTCGCCGCTTGTTTGTGACTAAACAACCCATTGGCGTGGTGGCAGCAATTACACCGTGGAATTTCCCAAAT GCAATGATTACCCGTAAAGCGGCACCGGCGTTAGCGGCAGGTTGTGCGATTGTGATTAAACCGGCGGCAGAAACCCCGCT TTCTGCCTTAGCATTAGCCCAATTAGCGGATCAAGCAGGTATTCCCAAAGGGGTATTTAACATTATTACCAGTAGCGATG CCGAAGGTATAGGGCGGGAGTTGAGCACTCATCCGACCGTACGCAAACTCACCTTTACCGGCTCCACCCGTGTCGGCAAA ATTTTAATGCAACAATCGGCAGGGACGGTAAAAAAATTGGCATTGGAGCTAGGCGGTAATGCACCGGCGATTGTGTTTGA TGATGCGGATCTAGATACAGCGGTTGAGGGCGTGTTTGCCTCTAAATTCCGTAACGGTGGGCAAACCTGCGTCTGTGCTA ACCGAATTTATGTGCAAGCGGGCATTTATGAGCAATTTCTTGCAAAATTGAGTGAGAAAGTGGCTCAAATCAAGCTTGGC TCGCCATTTGAGGAAGAGGTCACGATGGGTGCACTAATTAGTGAACGAGCGGTGGAAAAAGTCGAAAGCCACATTAACGA TGCCCTTTCACTTGGGGCAGAACTGGTGTTAGGCGGTGAACGCCACGCACTGGGCGGCACATTCTTCCAACCAACTATTC TAAAAAATGTGACTCAAGAAATGAAAGTTGCCCGTGAGGAAACCTTTGCTCCCCTTGCCCCGATTTTCAAATTTGAAACC GAAGAAGAGGTTATCCAGTGGGCGAATGATACTGAGTTTGGTTTGGCGGCTTACTTATTCAGCCAAAATATCGGGCGAAT TTGGCGAGTGTCGGAACAGTTGGAATACGGTATTGTCGGGATTAACGAGGGGATCATCAGTAACGAAATAGCCCCATTCG GCGGCTGGAAAGAGTCCGGGCTTGGGCGGGAAGGTTCGAAATACGGTATTGAAGAGTTTTTAGAAATAAAATATCTTTGT ATGAAAGTATAA Protein sequence : MPNHKFLLLRFQAYINGKFVSSQNGKTFTVQNPTNGEKIGEVADLGTEETAQAIEAAAVAQKKWQALLPKERSVILRKWF ELIMQNQEELAQILSLEQGKPLAESRGEIAYGASFIEWFAEESKRIYGDVLPQDKAGRRLFVTKQPIGVVAAITPWNFPN AMITRKAAPALAAGCAIVIKPAAETPLSALALAQLADQAGIPKGVFNIITSSDAEGIGRELSTHPTVRKLTFTGSTRVGK ILMQQSAGTVKKLALELGGNAPAIVFDDADLDTAVEGVFASKFRNGGQTCVCANRIYVQAGIYEQFLAKLSEKVAQIKLG SPFEEEVTMGALISERAVEKVESHINDALSLGAELVLGGERHALGGTFFQPTILKNVTQEMKVAREETFAPLAPIFKFET EEEVIQWANDTEFGLAAYLFSQNIGRIWRVSEQLEYGIVGINEGIISNEIAPFGGWKESGLGREGSKYGIEEFLEIKYLC MKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 7e-141 | 63 |
