Gene Information

Name : J450_07645 (J450_07645)
Accession : YP_008220536.1
Strain : Mannheimia haemolytica D171
Genome accession: NC_021738
Putative virulence/resistance : Virulence
Product : Leukotoxin-activating lysine-acyltransferase lktC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1607251 - 1607706 bp
Length : 456 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAACTCCTCCCTCCACAAAGAATGGAGCTGTGAACTACTAGCACGCAATGTGATTCCTGCAATTGAAAATGAACAATA
TATGCTACTTATAGATAACGGTATTCCGATCGCTTATTGTAGTTGGGCAGATTTAAACCTTGAGACTGAGGTGAAATATA
TTAAGGATATTAGTTCATTAACACCGGAGGAATGGCAGTCTGGCGATAGACGTTGGATTATTGATTGGGTAGCACCATTC
GGACATTCTCAATTACTTTATAAAAAAATGTGTCAGAAATATGCTGATACACTCGTCAGATCTATACGCTTCCAACCAAA
TCAAAAATCAGTAGGAAAAATTGCTTATTTCAAAGGAGGTAAATTAGATAAAAAAACAGCAAAAAAACGTTTTGATACAT
ATCAAGAAGAGCTGGCAACAGCACTTAAAAATGAATTTAATTTTATTAAAAAATAG

Protein sequence : 
MNSSLHKEWSCELLARNVIPAIENEQYMLLIDNGIPIAYCSWADLNLETEVKYIKDISSLTPEEWQSGDRRWIIDWVAPF
GHSQLLYKKMCQKYADTLVRSIRFQPNQKSVGKIAYFKGGKLDKKTAKKRFDTYQEELATALKNEFNFIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 5e-32 52
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 5e-32 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
J450_07645 YP_008220536.1 Leukotoxin-activating lysine-acyltransferase lktC VFG0842 Protein 4e-30 53
J450_07645 YP_008220536.1 Leukotoxin-activating lysine-acyltransferase lktC VFG1559 Protein 2e-32 52
J450_07645 YP_008220536.1 Leukotoxin-activating lysine-acyltransferase lktC VFG1499 Protein 2e-32 52