Gene Information

Name : J450_07025 (J450_07025)
Accession : YP_008220413.1
Strain : Mannheimia haemolytica D171
Genome accession: NC_021738
Putative virulence/resistance : Virulence
Product : ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1468544 - 1469191 bp
Length : 648 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGATTAGTATTAGAAATGTCAGTAAGCGTTATAGAATAAATAGCGGTTGGCGTACCGTTCTTAAAGATATTAACTTTGA
GCTAAAAAAAGGTGAAAAAGTGGGTATTTTAGGGCGCAATGGTGCAGGAAAATCAACCTTAATCCGTTTAATGAGCGGAG
TAGAACCTCCAACAACAGGTACGATTGAACGTCAAATGTCGATTTCTTGGCCACTGGCATTTAGTGGTGCATTCCAGGGT
AGTTTGACCGGAATGGATAATCTTCGTTTCGTCAGCCGAATTTATGATGCTGATTTTGACTATGTAAAATCTTTCACCGA
AGAATTTTCAGAACTCGGCGAATATTTATATGAACCGGTAAAAAGCTATTCTTCTGGTATGAAGGCCCGTTTAGCCTTTG
CATTATCGCTTTCTATTGAATTTGATTGTTACTTAATTGATGAAGTGATTGCAGTAGGCGATGCTCGATTCGCTGCCAAA
TGTAAGCACGAGCTTTTTGAAAAACGGAAAGACCGTTCATTGATTTTAGTTTCTCATAGCCCAGCCTCAATTAAAGAATA
TTGCGATTCTGCAATGGTTTTAGAAGAGGGTATCATGCATACTTTTGATTCTATAGATAACGCTTATAATTTCTACAATA
AAACATAA

Protein sequence : 
MISIRNVSKRYRINSGWRTVLKDINFELKKGEKVGILGRNGAGKSTLIRLMSGVEPPTTGTIERQMSISWPLAFSGAFQG
SLTGMDNLRFVSRIYDADFDYVKSFTEEFSELGEYLYEPVKSYSSGMKARLAFALSLSIEFDCYLIDEVIAVGDARFAAK
CKHELFEKRKDRSLILVSHSPASIKEYCDSAMVLEEGIMHTFDSIDNAYNFYNKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 8e-82 78
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 7e-46 47
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-46 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
J450_07025 YP_008220413.1 ATP-binding protein VFG0696 Protein 2e-85 80
J450_07025 YP_008220413.1 ATP-binding protein VFG0258 Protein 3e-82 78
J450_07025 YP_008220413.1 ATP-binding protein VFG2563 Protein 3e-60 58
J450_07025 YP_008220413.1 ATP-binding protein VFG1449 Protein 2e-46 47