Gene Information

Name : J450_07020 (J450_07020)
Accession : YP_008220412.1
Strain : Mannheimia haemolytica D171
Genome accession: NC_021738
Putative virulence/resistance : Virulence
Product : sugar ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1467750 - 1468547 bp
Length : 798 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCGATATGGTGATAATACAACCTTTAAACGTTCCTGCGTGATTCAAAAACGAGTGATTCACGCTCTTTTAATGCGAGA
GTTGATCACCCGTTATGGGCGTAGAAATATTGGCTTTTTATGGCTGTTTATTGAACCCTTATTATTAACTCTAATCATTT
CATTAGCTTGGAAGTACATTAAAGCTGATAAATATTCTACGCTTAATATTGTTGCATTTATGCTTACCGGCTATCCGATT
GCAATGATGTGGAGAAATACAACAAATAGATCTAAGGGAGCTATATCCGCAAATATTAGCCTGCTTTATCATCGAAACGT
TCGTGTATTAGATACCATATTCACTCGAGCTTTATTGGAAGTTGCAGGGACATCTATTGCTCAAATCCTATTAATGGCGT
TTTTTATCGCTATTGGCTGGATAGATGTACCCCACGATATTTTCTATATGCTTTGTGCTTGGGTATTAATGGCATTTTTT
GCATTAGGTTTAGGCTTAATTATCTGTGCATTAGCACATTATATTGAACCATTTGGCAGAATTTGGGGAACCTTTAGCTT
CGTATTACTTCCATTGTCCGGAGCATTCTTTTTCGTCCATAACTTACCATCACAAGCACAGCAAATCGCACTGTGGTTTC
CAATGATTCACGGTACAGAAATGTTCAGACATGGCTATTTTGGCGAAACTGTCATTACCTATGAAAGCATTAGTTATATT
ATAGTCAGCGATCTTATTCTGTTATTCATCGGCTTACTCTTTGTGAGAAGTTTTAGTAAAGGAATCGAACCTAGATGA

Protein sequence : 
MRYGDNTTFKRSCVIQKRVIHALLMRELITRYGRRNIGFLWLFIEPLLLTLIISLAWKYIKADKYSTLNIVAFMLTGYPI
AMMWRNTTNRSKGAISANISLLYHRNVRVLDTIFTRALLEVAGTSIAQILLMAFFIAIGWIDVPHDIFYMLCAWVLMAFF
ALGLGLIICALAHYIEPFGRIWGTFSFVLLPLSGAFFFVHNLPSQAQQIALWFPMIHGTEMFRHGYFGETVITYESISYI
IVSDLILLFIGLLFVRSFSKGIEPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 4e-78 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
J450_07020 YP_008220412.1 sugar ABC transporter permease VFG0685 Protein 5e-87 73
J450_07020 YP_008220412.1 sugar ABC transporter permease VFG0697 Protein 5e-87 73
J450_07020 YP_008220412.1 sugar ABC transporter permease VFG0257 Protein 2e-78 66
J450_07020 YP_008220412.1 sugar ABC transporter permease VFG2564 Protein 2e-48 45