Gene Information

Name : J450_07015 (J450_07015)
Accession : YP_008220411.1
Strain : Mannheimia haemolytica D171
Genome accession: NC_021738
Putative virulence/resistance : Virulence
Product : capsule polysaccharide transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1466647 - 1467750 bp
Length : 1104 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGTCAAAGAAGAAAAAACATTTTTTAGCCAACCCTTTGTTGTGGCTAACTGTAATTATTCCAACTGCTTGTTCCGGAAT
TTATTATTCCTTATTTGCCTCTGATATTTATGTTTCAGAATCTAGCTTTGTGGTTCGTTCACCGAATAATCAATCCAGCT
TAACCGGCGTGGGTGCTTTATTGCAAAACTCCGGTTTCGCCCGTTCTCAAGATGATACCTATTCAGTTCAGGAATATATG
CGTTCCCGTACCGCATTAGAGCAACTTGAAGCAGAAATTCCGGTAAAACGTTTTTATAGTGAGCAAGGTGATTTACTAAG
CAAATTTAACGGTTTCGGATTTAACGATACCCAAGAAGCGTTTTACCGTTACTTTAAAGAACATCTGAATATTGATGTCG
ATTCTATTTCAGGTATTGCGACGTTACGCGTTCGTGCTTTTAATGCCGAAGAAGGGCAGAAAATTAACGAGAATTTATTA
CAGCAAGGAGAAACATTAATTAACCGTCTTAATGAAAGAGCAAGACAAGATACGGTTGAGTTTGCAGAAGAACGCGTAAA
AGAGGCCGAAAAAGATGTCAATAATACTGCGTTAGCATTAAGCCAATATCGAACCAAAAATAAAATTTATGATTTACCTG
CACAATCCGGCGTTCAGCTCTCATTAATTTCTACCTTAAAAAGTGAATTAATTCGGGTTGAAACACAATTAGCACAATTG
CAGTCAATTACGCCGGATAATCCTCAGGTAGCCGCATTACAAATGCGTCAAAAAAGTTTGAAAAAAGAAATTGATGACCA
ATCTAAACAACTTGCAGGAGGTAATACTTCTGTGGCAACGCAAACAGCTGAATATCAGCGTTTAGTTTTAGCTAACGAGC
TAGCTCAACAACAGCTTTCAGCGGCAATGACATCGCTACAAAATACAAGAGGAGAGGCTGATCGCCAGCAACTTTATTTA
GAGGTAATTGGTAAACCAAGCAAACCGGATTGGGCATTAGAACCCTACAGAATTTATAATATTATATCAACTTTTTTTAT
CGGCTTAATTCTATTTGGAGTATTAAGTTTGTTAATAGCAAGTATCAGAGAGCATAAAAACTAA

Protein sequence : 
MSKKKKHFLANPLLWLTVIIPTACSGIYYSLFASDIYVSESSFVVRSPNNQSSLTGVGALLQNSGFARSQDDTYSVQEYM
RSRTALEQLEAEIPVKRFYSEQGDLLSKFNGFGFNDTQEAFYRYFKEHLNIDVDSISGIATLRVRAFNAEEGQKINENLL
QQGETLINRLNERARQDTVEFAEERVKEAEKDVNNTALALSQYRTKNKIYDLPAQSGVQLSLISTLKSELIRVETQLAQL
QSITPDNPQVAALQMRQKSLKKEIDDQSKQLAGGNTSVATQTAEYQRLVLANELAQQQLSAAMTSLQNTRGEADRQQLYL
EVIGKPSKPDWALEPYRIYNIISTFFIGLILFGVLSLLIASIREHKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrB NP_273136.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 3e-104 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
J450_07015 YP_008220411.1 capsule polysaccharide transporter VFG0698 Protein 8e-138 81
J450_07015 YP_008220411.1 capsule polysaccharide transporter VFG0686 Protein 8e-138 81
J450_07015 YP_008220411.1 capsule polysaccharide transporter VFG0256 Protein 1e-104 58
J450_07015 YP_008220411.1 capsule polysaccharide transporter VFG2565 Protein 5e-70 41