|
Name : J450_06960 (J450_06960) Accession : YP_008220400.1 Strain : Mannheimia haemolytica D171 Genome accession: NC_021738 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : - COG ID : - EC number : - Position : 1451239 - 1453320 bp Length : 2082 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAGTGAACAATTATTAGACGGCGTGCCATTAACCGCCCTTTCCGGCGTAGGAGCGGCAATTTCCGAAAAGTTAAGTCG AATCGGCATTAATAATGTGCAGGATTTACTGTTTCATCTGCCAATGCGGTATGAAGATCGCACCCGTATTACCCCGATTG CTGATGTTCGCCCGGAAAGCTTTGCCACCATTGAAGGCTATGTACAACTTACCGAAGTCCAGTTTGGTAAACGCCCGATT TTATCGGTTACACTCTCCGACAGCACCAGCAAAATTATGCTTAAATTCTTCAATTTCAATGCTGGAATGAAAAATAGCCT TGCCACCGGCGTTCGGGTAAAAGCCTTTGGGGAAATTAAGCGTGGGCGATTTATGGCGGAAATTCACCACCCTGAATATC AAATTATTCGGGATAATCAACCGCTTGTACTGGCTGAAACCCTGACCCCGATTTACTCCACCACTGAGGGGTTAAAACAA GCCTCGCTGCGGAAATTAACCGAGCAAGCCCTCGCTTTATTAGAGAAAGTGAAAGTCGCCGAGCTGTTGCCTGATGAATA CAATCCGCACAAATACAGCCTAAAAGAAGCGTTGCAGTTATTGCACCGCCCACCGCCGACGATTTCTGCCGAAGTCTTGG AAAAAGGTGACCACCCTGCTCAAAAACGGCTGATTTTTGAAGAACTGCTGGCACACAATTTAGCGATGCAGCAACTCCGT TTAGGGGTAAAACAGCAATATGCAGAGGCACTTACTTACCAAACCGATATAAAACAGCGTTTTCTCGACAGTTTGCCTTT TAAGCCTACTCACGCACAAAGCCGAGTAACCGCAGATATTGAGCAAGATCTTGCCAAACCACACCCGATGATGCGACTGG TACAAGGCGATGTTGGTTCAGGTAAAACCTTAGTAGCCGCCTTGGCAGCACTATTAGCGATTGATAACGGCAAGCAGGTG GCATTAATGGCACCGACCGAAATTCTTGCCGAACAGCACGCCAATAATTTTGCCAACTGGCTTAATCCCTTTGGGATTGA GGTTGGCTGGCTTGCCGGTAAAGTGAAAGGCAAGGCGAGAACCGCACAACTTGAGGCAATCAAAAACGGTGATGTGCAGA TGATTATCGGCACTCACGCCCTGTTCCAAGACAATGTGGAATTTCACCATTTAGCGTTGGTGATTATTGATGAACAACAC CGTTTTGGCGTACACCAACGGCTGACCTTGCGGGAAAAAGGAGCGAAAGAAAATAACTATCCGCATCAGCTCATTATGAC GGCGACCCCCATTCCGAGAACGCTGGCAATGACGGTCTATGCTGACCTCGACACCTCAATCATTGACGAACTGCCACCGG GTAGAACGCCAATCACGACTGTGGTGATTTCTGAAGATCGGCGAGCAGAAATCGTCCAACGGGTGTACCAAGCCTGTAAG CAAGAACACCGCCAAGCCTATTGGGTCTGCACCCTGATTGATGAAAGCGAAGTGTTGGAGGCTCAAGCCGCGGCAGCGAT TGCCGAAGATTTACAGCGAGCCTTGCCGGATTTACGCATCGGGTTAGTACACGGACGGCTGAAACCACAGGAAAAACAAG CGATTATGGCGGAATTTAAGGCAGCGAATTTAGATTTGCTGGTTGCGACCACCGTAATTGAAGTGGGAGTGGACGTGCCG AATGCTAGCCTAATGATTATCGAAAATTCCGAACGACTCGGGCTGGCTCAACTCCACCAGTTGCGTGGACGTGTTGGGCG AGGGGCAACCGCCTCGCATTGCGTCTTAATGTACAAACCGCCGCTCGGGAAAATTTCCAGCAAGCGGTTACAAGTGATGC GTGATAGCCAAGACGGTTTCTACATTGCCGAAAAAGATTTGGAGATTCGAGGCACAGGTGAAATTCTCGGCACAAAACAG ACCGGAATGGCAGAATTTAAGGTGGCGGATTTAATGCGAGACCGCAAAATGATTCCGCTGGTGCAACGTTACGCCAAGCA AATTATTAGCGAAAATCAACCGCTTGCAGAGGCGTTAATTAAGCGTTGGTTAGACAACAAGGCGGAATATACCAACGCTT AA Protein sequence : MSEQLLDGVPLTALSGVGAAISEKLSRIGINNVQDLLFHLPMRYEDRTRITPIADVRPESFATIEGYVQLTEVQFGKRPI LSVTLSDSTSKIMLKFFNFNAGMKNSLATGVRVKAFGEIKRGRFMAEIHHPEYQIIRDNQPLVLAETLTPIYSTTEGLKQ ASLRKLTEQALALLEKVKVAELLPDEYNPHKYSLKEALQLLHRPPPTISAEVLEKGDHPAQKRLIFEELLAHNLAMQQLR LGVKQQYAEALTYQTDIKQRFLDSLPFKPTHAQSRVTADIEQDLAKPHPMMRLVQGDVGSGKTLVAALAALLAIDNGKQV ALMAPTEILAEQHANNFANWLNPFGIEVGWLAGKVKGKARTAQLEAIKNGDVQMIIGTHALFQDNVEFHHLALVIIDEQH RFGVHQRLTLREKGAKENNYPHQLIMTATPIPRTLAMTVYADLDTSIIDELPPGRTPITTVVISEDRRAEIVQRVYQACK QEHRQAYWVCTLIDESEVLEAQAAAAIAEDLQRALPDLRIGLVHGRLKPQEKQAIMAEFKAANLDLLVATTVIEVGVDVP NASLMIIENSERLGLAQLHQLRGRVGRGATASHCVLMYKPPLGKISSKRLQVMRDSQDGFYIAEKDLEIRGTGEILGTKQ TGMAEFKVADLMRDRKMIPLVQRYAKQIISENQPLAEALIKRWLDNKAEYTNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-100 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| J450_06960 | YP_008220400.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 58 |
