Gene Information

Name : J450_06740 (J450_06740)
Accession : YP_008220362.1
Strain : Mannheimia haemolytica D171
Genome accession: NC_021738
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1410773 - 1411645 bp
Length : 873 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: GeneMa

DNA sequence :
ATGACTAATCGCTATGATTTAAACAGACAACTTGCTCAAATGTTAAAAGGCGGTGTAATTATGGATGTAACTACCCCTGA
GCAAGCCTGCATTGCGGAAGAAGCTGGAGCTTGTGCAGTAATGGCACTAGAGAGAATTCCTGCAGATATTCGTGCAGCTG
GTGGCGTTTCTCGTATGAGTGATCCCAAGATGATAAAGAGTATCCAAGCAGCGGTATCCATTCCTGTAATGGCGAAAGTA
CGTATTGGACACGTTACAGAAGCACAAATCCTGCAAGCGATCGAAATTGACTATATTGACGAAAGTGAGGTGCTTTCTCC
TGCAGATGATACCTTCCACATTAACAAGCGTAAATTTGAAGTGCCATTTGTATGTGGAGCAAAAAATTTAGGCGAAGCCC
TACGTCGTATTAATGAAGGCGCTGCTATGATCCGTAGTAAGGGCGAGCCAGGAACAGGCAATGTGGTGCAAGCAGTACAT
CATCTTCGCAAAATGAAACAAGAAATTGCCCGCTTGGTTTCACATACCACAGATGAACTTTATCACGTAGCTAAAGAGCT
CCAAGTACCATTTGATTTAGTACAATATGTACATCAGTACCAAAAATTGCCTGTTGTCACCTTTGCTGCTGGAGGTATTG
CAACCCCTGCCGATGCTGCATTGATGATGCAGTTAGGTGCAGAAGGAGTCTTCGTTGGCTCAGGTATTTTCAAGTCAGGC
GATCCTGCTAAACGAGCGCGGGCCATTGTACAAGCTGTTACCAACTACAACGATCCTAAATTACTTGCGGAGCTTTCTGA
AAATTTAGGTGAAGCAATGGTAGGAATTAATGAGCAAGAGATTGAATTGCTAATGGCAGCAAGAGGTGTCTAA

Protein sequence :
MTNRYDLNRQLAQMLKGGVIMDVTTPEQACIAEEAGACAVMALERIPADIRAAGGVSRMSDPKMIKSIQAAVSIPVMAKV
RIGHVTEAQILQAIEIDYIDESEVLSPADDTFHINKRKFEVPFVCGAKNLGEALRRINEGAAMIRSKGEPGTGNVVQAVH
HLRKMKQEIARLVSHTTDELYHVAKELQVPFDLVQYVHQYQKLPVVTFAAGGIATPADAALMMQLGAEGVFVGSGIFKSG
DPAKRARAIVQAVTNYNDPKLLAELSENLGEAMVGINEQEIELLMAARGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-82 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-82 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-82 70