Gene Information

Name : BJAB0715_03144 (BJAB0715_03144)
Accession : YP_008218292.1
Strain : Acinetobacter baumannii BJAB0715
Genome accession: NC_021733
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3273902 - 3275272 bp
Length : 1371 bp
Strand : +
Note : COG:COG0582

DNA sequence : 
TTGAGGATATATAAAGTTCTACTCAATACGTATCCTTATTCTGCCATGGCTAAGAAAACTATTCCGCTATCCGACTCCAA
ATGCACCGGTGCAAAGCCGCAGGAAAAAGATTATTCCTTATACGATGGTCATGGGCTGATTCTATTCATTCGTAAAAGTG
GCTCAAAAGTATGGCGATTTAAATATAAAAGAGCTAATGGTAAAGATGGCTTAATGACATTGGGTAACTTCCCTGCTTTA
AGTTTAAAAGCAGCCAGAGATAAGCGCCGTGAATTGGAGACACTATTAGCCAATGGAATAGATCCAATTGAATACAGCGA
AATACAAAAGGCTAAACTAGACAATAAATATAATTTTGAATCTATAGCTCGAGAATGGCATACAGCATATAAAAATACTG
GACGCTGGGGAACTGAAACAGCAGAAAGAGCTCTTAAGAATATGGAAGAGTATGTTTTCCCAAAACTTGGGAAAAAACCT
ATTGATGCAATCAAGCCAAAAGAACTGATTCAAGTAATTAAAAGTATTGAAGACTTAGGTTATACCGAAGTTGTAAAAAA
AACCCGGCAACGGCTAACAAGTATTTTTGCATTTGCAATGTCGAAAGGATTTATTGAAAGTAATCCAGCCTATGGTCTTC
AAGATATTTTCATCCTTTCAAAGAAAACCAAACATCACCCTCAATTACCATTAGAAAGATTACCCGAGTTACAAGCTAAA
TTAGCTTCCGATACAGGTCATCCACTTACTCGACTATGTGTTGAATTTGCATTACATACTTTTGCTCGTTCAAGTGAGAT
TAGATTTGCAAGGTGGAAGGAATTTGATTTTGAGAATGCTATTTGGACCATTCCCCCAACTAGAGATTTTGTAGAAGGTT
ACAAATATTCTCATCGCGGTGCGAAAATGAAGGCACCTCATTTAATTCCTCTCTCGAACCAGGCACTAGCTATAATAAAA
GAGATCTTTAAATACAGCGGACATACTCAGAATGTTTTTCCTAAAAACGGTGATCCGCATGGCTTTATGAGTGAATCAAC
TATCAATAAAACTCTACGCCGTCTTGGATATGATACAAACATTGAAGTTTGTGGCCATGGATTTAGGGGTATGGCCTGTG
CTGCCCTAATTCAAAGTAAACTTTTCCAGAAAGATGCTGTTGAAAAGCAAATGAGTCACCAAGAGCGCAATAATGTACGA
CTTGCATATACCCATAAAGCAGAGTTCTTAGAAGAAAGGAAAACAATGCTCAATTGGTGGAGTAGTTATTTAGATGCGAC
TAAAGAAACAAGTATTAGTCCATATGATTATACAGCACAGATTTTAGGTGAAGAGATCATACAATTTAAGTATGCAAAAT
TGATGAAATAA

Protein sequence : 
MRIYKVLLNTYPYSAMAKKTIPLSDSKCTGAKPQEKDYSLYDGHGLILFIRKSGSKVWRFKYKRANGKDGLMTLGNFPAL
SLKAARDKRRELETLLANGIDPIEYSEIQKAKLDNKYNFESIAREWHTAYKNTGRWGTETAERALKNMEEYVFPKLGKKP
IDAIKPKELIQVIKSIEDLGYTEVVKKTRQRLTSIFAFAMSKGFIESNPAYGLQDIFILSKKTKHHPQLPLERLPELQAK
LASDTGHPLTRLCVEFALHTFARSSEIRFARWKEFDFENAIWTIPPTRDFVEGYKYSHRGAKMKAPHLIPLSNQALAIIK
EIFKYSGHTQNVFPKNGDPHGFMSESTINKTLRRLGYDTNIEVCGHGFRGMACAALIQSKLFQKDAVEKQMSHQERNNVR
LAYTHKAEFLEERKTMLNWWSSYLDATKETSISPYDYTAQILGEEIIQFKYAKLMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intB CAD42017.1 bacteriophage P4 integrase Not tested PAI II 536 Protein 1e-86 47
APECO1_1051 YP_853069.1 phage integrase Not tested PAI IV APEC-O1 Protein 6e-66 46
int NP_458759.1 bacteriophage integrase Not tested SPI-7 Protein 5e-85 46
int NP_807963.1 bacteriophage integrase Not tested SPI-7 Protein 5e-85 46
int CAB59974.1 integrase Not tested HPI Protein 8e-90 46
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 1e-82 46
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 1e-82 46
intB AAD37509.1 P4-like integrase Not tested PAI IV 536 Protein 5e-73 46
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 2e-88 45
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 7e-91 45
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 6e-91 45
int AAK00456.1 Int Not tested SHI-1 Protein 2e-84 45
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 2e-90 45
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 8e-91 45
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 7e-91 45
int AAK16198.1 Int Not tested PAI-I AL862 Protein 2e-90 45
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 2e-90 45
int AAL51003.1 CP4-like integrase Not tested LEE Protein 4e-89 45
Z4313 NP_289539.1 pathogenicity island integrase Not tested OI-122 Protein 2e-88 45
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 4e-89 45
ECO103_3550 YP_003223418.1 integrase Not tested LEE Protein 4e-89 45
int-phe AAL57571.1 CP4-like integrase Not tested LEE Protein 3e-89 45
ECO26_5300 YP_003232178.1 integrase Not tested LEE Protein 4e-89 45
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 9e-88 45
int AAL51028.1 CP4-like integrase Not tested LEE Protein 3e-89 45
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 1e-89 45
int-phe AAL60261.1 Int-phe Not tested LEE Protein 3e-89 45
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 2e-90 45
int CAC81896.1 integrase Not tested LEE II Protein 1e-82 45
int CAA08754.1 integrase Not tested HPI Protein 8e-89 45
int YP_002346908.1 integrase Not tested HPI Protein 3e-88 45
y2393 NP_669700.1 prophage integrase Not tested HPI Protein 3e-88 45
int2 NP_993013.1 integrase Not tested HPI Protein 3e-88 45
int CAA21384.1 - Not tested HPI Protein 3e-88 45
unnamed ABR13507.1 phage integrase Not tested PAGI-6 Protein 2e-90 44
unnamed AAD17660.1 unknown Not tested HPI Protein 1e-85 44
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 2e-84 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJAB0715_03144 YP_008218292.1 Integrase VFG1536 Protein 8e-87 47
BJAB0715_03144 YP_008218292.1 Integrase VFG0626 Protein 3e-91 45
BJAB0715_03144 YP_008218292.1 Integrase VFG1693 Protein 6e-90 45