Gene Information

Name : LOCK908_0989 (LOCK908_0989)
Accession : YP_008205491.1
Strain : Lactobacillus rhamnosus LOCK908
Genome accession: NC_021725
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 958375 - 959040 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAATTTTAACGGCACGCCAATTGACCAAGCAATATGCTGGTGAAGCGCATCCGGCACTGGATCATGCCAATTTGAC
GATTGAACAAGGCGAGTTTGTTGCCATAGTGGGGCCGAGTGGTTCAGGAAAGTCAACCTTGCTTCATTTGTTAGGCGGGA
TTGATCAGCCAACCAGTGGGGAGGTCCGGTTATATGACACGGATATCTACGCACTGAATCAAACGCAACTGGCGATTTTT
CGACGTCGGCAAGTCGGCTTGATTTATCAGTTTTACAACTTGATTCCGAACTTGACGGTGGCTGAGAATATCACATTGCC
AGCGGATTTGGATGGACGGTCAATTAAAGAAGCCGTTTTGACGGAGATGTTAACAACCTTGGGCCTTGTCGAAAAGGCAT
CTGCTTTGCCTAATCAGCTTTCAGGCGGGCAGCAGCAACGGGTGGCAATTGGACGGGCGTTAATCAATCATCCCGCGGTT
ATTTTGGCCGATGAACCTACAGGCAATCTTGATCGCCGGAATTCACAGGATGTGATGACGCTACTACGACAAGCCAATAT
TAAGCAGGGGCAGACACTGGTCGTGATCACCCATGATCCAGACATTGCCAGTCAAGCTGATCGTATTGTCCGCATTGACG
ATGGGGTCGTGAGCGGGGGGCGGTGA

Protein sequence : 
MAILTARQLTKQYAGEAHPALDHANLTIEQGEFVAIVGPSGSGKSTLLHLLGGIDQPTSGEVRLYDTDIYALNQTQLAIF
RRRQVGLIYQFYNLIPNLTVAENITLPADLDGRSIKEAVLTEMLTTLGLVEKASALPNQLSGGQQQRVAIGRALINHPAV
ILADEPTGNLDRRNSQDVMTLLRQANIKQGQTLVVITHDPDIASQADRIVRIDDGVVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-35 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK908_0989 YP_008205491.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-54 55
LOCK908_0989 YP_008205491.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-50 51
LOCK908_0989 YP_008205491.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-35 48
LOCK908_0989 YP_008205491.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-38 42