Gene Information

Name : LOCK908_2489 (LOCK908_2489)
Accession : YP_008206966.1
Strain : Lactobacillus rhamnosus LOCK908
Genome accession: NC_021725
Putative virulence/resistance : Resistance
Product : Manganese ABC transporter, ATP-binding protein SitB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2481937 - 2482680 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAACAGTCAAGAACCTGACCGTTGCCTACGCTGACACACCGGTGTTTGCTGATGTTGCCGTTCATTTTAACGCAGG
TAAGATCACCGGGATCATTGGGCCTAACGGAGCAGGTAAATCGACCTTGATCAAAGCTATTCTAGGTTTGATCAAGGTTC
AATCAGGGAAGGTCGACTTTTCCGGCCACACCCTCAAGGAAGTGCAACAAGCGATTGCTTATGTCGAGCAGCGCAAGGAT
TTGGATCTGACTTTTCCAATTAACGTGTTAGATCTTGTGCTGACTGGCACCTATGGACGTCTGGGGTTGTTGAAGAGCCC
CGGTAAAAAAGAGCGTCAGGCGGCACTTGAAGCGCTGGAACAAGTCGGGTTGGCGGATTTCACCAAACGCCAGATCAGTC
AGCTATCAGGCGGCCAGCTACAGCGCGTGTTTGTGGCGCGTGCCATTGTGCAGCAGGCTGACATCATGATCCTGGACGAG
CCATTTGTCGGTATTGACATGAAGAGCGAGCAGGAAATCATGGCCATTTTGAATCAGTGGCGCGATGCCGGAAAAACACT
GATTGTCGTTCATCACGATTTAAATAAAGTTTCAAATTATTTTGATGAACTTGTGGTGATGAACCACGGCATTATTGCTG
AAGGACCGGTCGAAGAAGTGTATACGGCTCAAAATATCGAACGGGCATTTTCGGCCGATCTTTCCAACGTGCTGTTTGCA
ACCAAGGAAGGGGCGAGCGTATGA

Protein sequence : 
MLTVKNLTVAYADTPVFADVAVHFNAGKITGIIGPNGAGKSTLIKAILGLIKVQSGKVDFSGHTLKEVQQAIAYVEQRKD
LDLTFPINVLDLVLTGTYGRLGLLKSPGKKERQAALEALEQVGLADFTKRQISQLSGGQLQRVFVARAIVQQADIMILDE
PFVGIDMKSEQEIMAILNQWRDAGKTLIVVHHDLNKVSNYFDELVVMNHGIIAEGPVEEVYTAQNIERAFSADLSNVLFA
TKEGASV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 6e-48 45
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 4e-48 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK908_2489 YP_008206966.1 Manganese ABC transporter, ATP-binding protein SitB BAC0400 Protein 2e-54 49
LOCK908_2489 YP_008206966.1 Manganese ABC transporter, ATP-binding protein SitB BAC0440 Protein 7e-47 41