Gene Information

Name : LOCK908_2004 (LOCK908_2004)
Accession : YP_008206485.1
Strain : Lactobacillus rhamnosus LOCK908
Genome accession: NC_021725
Putative virulence/resistance : Virulence
Product : Transcriptional regulator, PBSX family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1964737 - 1964940 bp
Length : 204 bp
Strand : +
Note : -

DNA sequence :
ATGAATCGTGTACGTGAATTTCGCCGTGAAAAGAAACTCTCGCAGCTTGCTTTGGCAGAAAAGATCGGCGTTGCCCGACA
AACGATCAACCTCATCGAAAATGGGAAATACAATCCTTCTTTGGAACTTTGTCTCAAACTGTCGTGGACACTAGGCACGG
ATCTCAACACATTGTTTTGGAGGGAAAAGAATGAAGAACTTTGA

Protein sequence :
MNRVREFRREKKLSQLALAEKIGVARQTINLIENGKYNPSLELCLKLSWTLGTDLNTLFWREKNEEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-10 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-07 49
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-07 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK908_2004 YP_008206485.1 Transcriptional regulator, PBSX family VFG2168 Protein 8e-08 49
LOCK908_2004 YP_008206485.1 Transcriptional regulator, PBSX family VFG2175 Protein 8e-08 49