Gene Information

Name : LOCK908_1990 (LOCK908_1990)
Accession : YP_008206471.1
Strain : Lactobacillus rhamnosus LOCK908
Genome accession: NC_021725
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1950022 - 1950729 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGATGAATGAAGTTGTTGTGGTAAAAAACCTAAAAAAGGAAATTGAGTTGGCACAGGGAAATGTGTTAGAGGTTTTAAG
TGATATTTCTTTTGAGATAAAGCAAGGAGAATTTGTATCGATCGTGGGTCCTTCAGGTTCGGGAAAATCAACTTTACTGT
ATTGTATATCTAGTTTATTGCCACCTACTGAAGGGGAAGTGCTAATTAAGGGAAAATCTCCTTATGAATGGAGTGCTTCA
AAATTAGCCAAGTTTCGACGGCAAGAAATTGGCTTTATTTTTCAGGATTATCAATTGATACCATCGCTATCAGCCTTTGA
TAACTTGATGTTACCAGGTATCTTGAATGGACGAAAAATTGAAAAATCCTCCGTGGAAGCAATCGCAACACGGCTTGAGT
TGAAAGTAGAACTCAATCAGCCAATTGACGCACTTTCAGGTGGTGAACAGCAACGAGTGGCTATTGCACGAACTATTTTA
GCTAACCCGGAGATTATTTTTTTAGATGAACCAACCAGCGCTTTGGATACCCATTCACGTAAGTTGACAATGGGTTTATT
TCATGAATTGGTGGGTCAAGGAAAAACGATTATTATGGTAACTCATGATTTGGAACTCGCTGAGAAAACTTCCCGAACAA
TCGTGATGAGAGATGGAAAAATTGAAAGAGATATTGAATTGACACAGTTTAATACTGTTACAATATAA

Protein sequence : 
MMNEVVVVKNLKKEIELAQGNVLEVLSDISFEIKQGEFVSIVGPSGSGKSTLLYCISSLLPPTEGEVLIKGKSPYEWSAS
KLAKFRRQEIGFIFQDYQLIPSLSAFDNLMLPGILNGRKIEKSSVEAIATRLELKVELNQPIDALSGGEQQRVAIARTIL
ANPEIIFLDEPTSALDTHSRKLTMGLFHELVGQGKTIIMVTHDLELAEKTSRTIVMRDGKIERDIELTQFNTVTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-40 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-40 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-40 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK908_1990 YP_008206471.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-35 47
LOCK908_1990 YP_008206471.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-38 44
LOCK908_1990 YP_008206471.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-33 43