Gene Information

Name : LOCK900_0946 (LOCK900_0946)
Accession : YP_008202578.1
Strain : Lactobacillus rhamnosus LOCK900
Genome accession: NC_021723
Putative virulence/resistance : Unknown
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 919888 - 920622 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence :
ATGTCAACTCAAACAATCGTCCAGGTTTCCGATCTTCAACAGGGCTACGGTACAAAAACGGTGCTTAGCCACATCAATCT
AACATTGAATCGCGGTCAGATTCTCGCTTTGATCGGTCCTAGTGGCGCTGGTAAAACAACTTTGATCAGCACCATTATGG
GGATGATCCGTCCTCGCGCCGGGAAGGTTACCGTTTTTAACCAGCATGTTCCCAATCGCTTATTATTAGGCCGCATTGGT
TTTATGGCGCAAACCGATGCGTTGTACGAAAGCTTAACCGGAGCCGAAAATCTCACTTTTTTTGCCAAAATGCAAGGCGT
TGGCCGTTCCTTACTGACCAAACAGTTAATGTATGCTGCTGACGTTGTTGATTTACAAACTGCCCTTAAACAACCCGTCA
AGGCTTATTCAGGTGGAATGAAAAGACGTTTATCGTTGGCCATCGCTTTAATTGCCAAACCACAATTGTTGATTTTAGAC
GAGCCAACGATTGGCATCGATCCTGCGTTACGTCGCCAGATTTGGCAGGAATTGCATCGACTGGCAAAACAAGGCGTGAC
AATTATTTTAACCACCCATGTGATGGCGGACGCTGAAGAAGCGGATCTGCTCATGATGATTCGCAATGGTCAAGCAATCG
CTCAAGGCACACCGAAGCAGTTGCAAGTTGACTATCAAGCAGATTCGATTGAAACGGTATTTCTAGCCGCAGGGAGGCAG
CAAGATGCGCACTGA

Protein sequence :
MSTQTIVQVSDLQQGYGTKTVLSHINLTLNRGQILALIGPSGAGKTTLISTIMGMIRPRAGKVTVFNQHVPNRLLLGRIG
FMAQTDALYESLTGAENLTFFAKMQGVGRSLLTKQLMYAADVVDLQTALKQPVKAYSGGMKRRLSLAIALIAKPQLLILD
EPTIGIDPALRRQIWQELHRLAKQGVTIILTTHVMADAEEADLLMMIRNGQAIAQGTPKQLQVDYQADSIETVFLAAGRQ
QDAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 6e-54 47
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 2e-41 47
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 1e-55 46