Gene Information

Name : LOCK900_0883 (LOCK900_0883)
Accession : YP_008202516.1
Strain : Lactobacillus rhamnosus LOCK900
Genome accession: NC_021723
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 855935 - 856600 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAATTTTAACGGCACGCCAACTGACCAAGCAATATGCTGGTGAAGCGCATCCGGCACTGGATCATGCCAATTTGAC
GATTGAACAAGGCGAGTTTGTTGCCATAGTGGGGCCGAGTGGTTCGGGAAAGTCTACCTTGCTTCATTTGTTAGGCGGGA
TTGATCAGCCAACCAGTGGGGAGGTCCGGTTATATGACACAGATATCTACGCGCTGAATCAAACGCAACTGGCGATTTTT
CGACGTCGGCAAGTCGGCTTGATTTATCAGTTTTACAACTTGATTCCGAACTTGACGGTGGCTGAGAATATCACATTGCC
AGCGGATTTGGATGGACGGTCAATTAAAAAGACGGTTTTGACGGAGATGCTAGCAACCTTAGGCCTTGTCGAAAAGGCAT
CTGCTTTGCCTAATCAACTTTCAGGCGGGCAGCAGCAACGGGTGGCAATTGGACGGGCGTTAATCAATCATCCCGCAGTT
ATTTTGGCCGATGAACCCACAGGCAATCTTGATCGCCGGAATTCACAGGATGTGATGACGCTACTACGACAAGCCAATAT
TAAGCAGGGGCAGACACTGGTCGTGATCACCCATGATCCAGACATTGCCAGTCAAGCTGATCGTATTGTCCGCATTGACG
ATGGGGTCGTGAGCGAGGGGCGGTGA

Protein sequence : 
MAILTARQLTKQYAGEAHPALDHANLTIEQGEFVAIVGPSGSGKSTLLHLLGGIDQPTSGEVRLYDTDIYALNQTQLAIF
RRRQVGLIYQFYNLIPNLTVAENITLPADLDGRSIKKTVLTEMLATLGLVEKASALPNQLSGGQQQRVAIGRALINHPAV
ILADEPTGNLDRRNSQDVMTLLRQANIKQGQTLVVITHDPDIASQADRIVRIDDGVVSEGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-36 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK900_0883 YP_008202516.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-55 55
LOCK900_0883 YP_008202516.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-51 51
LOCK900_0883 YP_008202516.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-35 48
LOCK900_0883 YP_008202516.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-38 43