Gene Information

Name : LOCK900_0405 (LOCK900_0405)
Accession : YP_008202078.1
Strain : Lactobacillus rhamnosus LOCK900
Genome accession: NC_021723
Putative virulence/resistance : Unknown
Product : Oligo-1,6-glucosidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 406112 - 407788 bp
Length : 1677 bp
Strand : -
Note : -

DNA sequence :
GTGGAAAAATGGTGGAAAAACGCGGTCATTTATCAAATCTACCCAGCTAGTTTTCAAGATAGCAATAACGATGGCGTAGG
AGATTTAAGAGGTATAACTGAGCGATTGGACTACATTAAGAAATTAGGTGTAGATGTTTTATGGCTAAGTCCAATCTATA
AGTCACCTCAAGTCGATAATGGATACGACATTTCGGACTATCAGGCGATTAACCCAACTTTTGGTACGATGAAAGACTTT
GACGAATTATTAGCAAAAGCACATTCACTTGGGCTTAAAATCATGATGGACTTAGTGGTTAATCACACCTCTAACGAACA
TCATTGGTTCCAAGAATCACGAAAAGGCAAAGATAACCCGTATAGAGACTATTACATCTGGCGAGATGGGAAAGATGGCA
CAGCGCCAAACAACTGGGGATCATTCTTCACCGGGTCTGCTTGGAAATATGACGCTCAGTCAAACCAGTATTATTTACAC
TTGTTTGCCCCTGAACAACCAGACCTAAATTGGGAAAACCCTACAGTACGACATTCCGTTTACGACATGATGAACTGGTG
GGCAGACAAGGGCGTTGATGGATTTCGCATGGACGTTATCAATTATATTTCTAAGCCTGAGGGATTGCCTGATGGTAAAA
AAGGCAAACAGGAATTATATGCTAATCCCGAACCCTTAGTTGCCAACGGACATCATGTCCACGAATTCTTGCGAGAAATG
AATCAGACAGTGCTGAGCAAACACAATTTGATCAGTGTCGGCGAAACCCCAAGTGTGACAGTTGACGAGGCTGAAAAATA
TGCCAGCCTTGACAACAAAGAACTAAACATGGTCTTTCAATTCGAACATATGGGCTTGGACGGCAATTCAAACCCCGCCC
TAGGACGTTGGGCCGATCGTAAGGCTTCGTTAAAAGATCTTCGCGCCAATCTGACCAAATGGCAATTAGCCTTAGCCGGA
AAAGCATGGAATTCACTTTATTGGAATAACCACGATCAACCAAGAGTCGTATCCCGATTTGGCGATGATACCACCGAAGA
AAACCGCGTCCTCAGCGCTAAAATGCTTGCGACCATGCTGCACATGCAACAAGGAACCCCATATATCTATGAGGGTGAAG
AAATAGGCATGACCAATGCATACTTCTCCAAAATTGAAGACTATGTTGATATTGATTCACTTAACTCTTATCACCAAATC
GTTGAAGAGCAACATCTTGTCGACAAAACGACCATGATGAATTACATCAAGATGCATAGCCGCGATAATGCGCGGACGCC
GATGCAATGGAGTGATCACGAAAATGCAGGCTTTTCGAAACACAGTCCTTGGGAAAAAATGAACCCAAACTTTAAAACTA
TTAATGTTCAACAAGCATTGGGTGATCCAAATTCAGTGTTTTATTATTATCAAAAGCTCATCAAGCTACGTCATACACTC
CCAGTCATCACCGACGGCACCTACGCATTAATCCCCGGAAATTCTGACGATGAGGAGATTTATGCTTTCACAAGAACAAA
CGCTGATACCACACTTGTCGTCATTCTAAACTACACGAACAAAAACTTGACTCGCCATTATGATCTTCCAAGTCACGCGA
AAATATTAATTTCTAATTACGCTGATGATCAAGGAGACAACATTCGGCCATATGAAGCAAAAGTTTATCAATACTAA

Protein sequence :
MEKWWKNAVIYQIYPASFQDSNNDGVGDLRGITERLDYIKKLGVDVLWLSPIYKSPQVDNGYDISDYQAINPTFGTMKDF
DELLAKAHSLGLKIMMDLVVNHTSNEHHWFQESRKGKDNPYRDYYIWRDGKDGTAPNNWGSFFTGSAWKYDAQSNQYYLH
LFAPEQPDLNWENPTVRHSVYDMMNWWADKGVDGFRMDVINYISKPEGLPDGKKGKQELYANPEPLVANGHHVHEFLREM
NQTVLSKHNLISVGETPSVTVDEAEKYASLDNKELNMVFQFEHMGLDGNSNPALGRWADRKASLKDLRANLTKWQLALAG
KAWNSLYWNNHDQPRVVSRFGDDTTEENRVLSAKMLATMLHMQQGTPYIYEGEEIGMTNAYFSKIEDYVDIDSLNSYHQI
VEEQHLVDKTTMMNYIKMHSRDNARTPMQWSDHENAGFSKHSPWEKMNPNFKTINVQQALGDPNSVFYYYQKLIKLRHTL
PVITDGTYALIPGNSDDEEIYAFTRTNADTTLVVILNYTNKNLTRHYDLPSHAKILISNYADDQGDNIRPYEAKVYQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-154 55