Gene Information

Name : LOCK900_2334 (LOCK900_2334)
Accession : YP_008203942.1
Strain : Lactobacillus rhamnosus LOCK900
Genome accession: NC_021723
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2334434 - 2335102 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGATTTCACTTCAGAATATCAATAAGACATATTTTTTGAAGAAGAAAGATCGAGGACAACAAGTACTTCGAAATATCAA
TCTGGACGTTGATGACGGTGAATTTTTAGCCATAGTTGGTCCGTCCGGTTCCGGTAAATCGACACTGCTGCGAATTATTG
GCATGTTGGATAATGAATACTCGGGCACTTATCAATTTAACAAGCAAATCGTCGGCGATCTGAGTGACGATATTGTTTCC
GAAATTCGTAATCGTCGGGTTGGTTTTATTTTCCAAAACTTTGAACTGCTTGCCAGATATACTGTTGGCGAAAACATCAA
GCTGCCTTTACTTTATGGAAAAGATCGCGATGATCCAGATAATCACGTTTTAGAACTTCTGGAGATGGTTGGACTCCAGG
ATAAAATTGACGAGTATCCAGCTAGTCTATCCGGTGGGCAGCAGCAAAGAGTGGCAATAGCGCGATCACTCATTTTGAAC
CCTAGCCTTATCATAGCCGATGAGCCAACAGGAGCTTTGGATACCACCATGTCCAAAAAAATATTGCAGATACTGTTAAA
AATCAGTGGCCAGGGAAGAACTGTTATTATGGTCACCCATTCACCAGAAGCTGCCAGTTTTGCCAGTCGTCAAGTCAAGA
TTGTTGACGGCGTACTAACGGAAATATGA

Protein sequence : 
MISLQNINKTYFLKKKDRGQQVLRNINLDVDDGEFLAIVGPSGSGKSTLLRIIGMLDNEYSGTYQFNKQIVGDLSDDIVS
EIRNRRVGFIFQNFELLARYTVGENIKLPLLYGKDRDDPDNHVLELLEMVGLQDKIDEYPASLSGGQQQRVAIARSLILN
PSLIIADEPTGALDTTMSKKILQILLKISGQGRTVIMVTHSPEAASFASRQVKIVDGVLTEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK900_2334 YP_008203942.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 9e-48 49
LOCK900_2334 YP_008203942.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 1e-33 44
LOCK900_2334 YP_008203942.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 2e-36 41