|
Name : LOCK900_2261 (LOCK900_2261) Accession : YP_008203869.1 Strain : Lactobacillus rhamnosus LOCK900 Genome accession: NC_021723 Putative virulence/resistance : Unknown Product : Transcription antitermination protein NusG Function : - COG functional category : - COG ID : - EC number : - Position : 2257981 - 2258535 bp Length : 555 bp Strand : - Note : - DNA sequence : ATGGCTGAAACAGTTACATCAGCAGAGAAACGTTGGTATGTCTTGCACACTTATTCTGGTTACGAAAATAAGGTGAAGAC AAACCTTGAACAACGGACCAGCAGTATGAATATGGATGATTATATTTTCCGGGTAGTTGTTCCGGAAGAAGAAGAACACG AGCAAAAGAACGGCAAAGAGAAGATCGAAATGAAGAAGACTTTCCCGGGTTATGTGTTAGTCGAAATGGTCATGACGGAT CAATCATGGTTCGTAGTGCGGAACACGCCTGGCGTTACCGGTTTCGTGGGTTCCCATGGTGCAGGTTCAAAGCCGGCGCC ATTGTTGCCTGAAGAAGTTGCAAGTGTCTTGCATTCAATGGGCATGAGCACACGGCATCAGGATGTTGAGTTTGATGTGG GCGAACCCGTTACGATTATCGATGGTGCCTTTACCGGGATGCATGGTAAAGTAACCGCTGTTGATAAAGACAAGATGAAG CTCAAAGTCGTGACCGAAATGTTTGACCGCGAAGTCACTGCTGAACTGGATTTTGATCAAGTCGACAAACTGTAG Protein sequence : MAETVTSAEKRWYVLHTYSGYENKVKTNLEQRTSSMNMDDYIFRVVVPEEEEHEQKNGKEKIEMKKTFPGYVLVEMVMTD QSWFVVRNTPGVTGFVGSHGAGSKPAPLLPEEVASVLHSMGMSTRHQDVEFDVGEPVTIIDGAFTGMHGKVTAVDKDKMK LKVVTEMFDREVTAELDFDQVDKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 5e-40 | 55 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 8e-38 | 53 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 7e-28 | 42 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 7e-28 | 42 |
