Gene Information

Name : LOCK900_1933 (LOCK900_1933)
Accession : YP_008203543.1
Strain : Lactobacillus rhamnosus LOCK900
Genome accession: NC_021723
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1898566 - 1899324 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
ATGGACAAGCAACCTGTTGTAACGGTTGAAAATGTTACGAAAACATATGGCAAACAAGGGGAAAAACAAACGCCGGCACT
AAAGGGTGTGAGTTTTCAGGTTGAACCCGGTGAATTCGTTGGGATTATGGGTGCTTCAGGCTCCGGTAAAACCACTTTAT
TGAATATTCTAAGTACACTAGACACCCCGACGTCCGGTTCCGTTCGCATCAAAGGCGCCGATGTGACCAAACTCAAAGGA
GACGCCTTATCCGATTTTCGCGCTAAAAAAATCGGCTTTATTTTCCAGGATTTCAACTTACTAGAAAACTTAACCGGCCG
GGAAAACATTGCATTGCCGCTCGCCTTGCAAAATGTCAGCGCTAAAAAGCAAACCGAAGCTGTTGATAAGATCGCGCAAA
CGCTTGGCATTGAACACGTGTTGGATCATTACCCAACCGAACTGTCCGGTGGTCAAAAACAACGGGTAGCCGCAGCTCGG
GCATTGGTTCAGCAGCCGGATATTCTTTTTGGTGATGAACCAACCGGCGCACTTGATTCCAAGGCTGCGCGCGAATTGTT
GGATACCATGGCGCATTTGAATCGTGACGAAGGTGTGTCGATTCTGCTGGTGACCCATGATCCGTTTTCCGCCAGCTATG
CCAGTCGGATCTTGTTCATCAAAGACGGTCAGATCGGGTCTGAATTGGTTCACGGTGACAAGAGTCAAGAAGCTTTCTAT
CAAGAGATTCTTGAGACCCTCGGCACATTTCAGAAGTAG

Protein sequence : 
MDKQPVVTVENVTKTYGKQGEKQTPALKGVSFQVEPGEFVGIMGASGSGKTTLLNILSTLDTPTSGSVRIKGADVTKLKG
DALSDFRAKKIGFIFQDFNLLENLTGRENIALPLALQNVSAKKQTEAVDKIAQTLGIEHVLDHYPTELSGGQKQRVAAAR
ALVQQPDILFGDEPTGALDSKAARELLDTMAHLNRDEGVSILLVTHDPFSASYASRILFIKDGQIGSELVHGDKSQEAFY
QEILETLGTFQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK900_1933 YP_008203543.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 1e-32 43
LOCK900_1933 YP_008203543.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 8e-37 42
LOCK900_1933 YP_008203543.1 ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 3e-32 42
LOCK900_1933 YP_008203543.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 2e-30 42