Gene Information

Name : LOCK900_1348 (LOCK900_1348)
Accession : YP_008202974.1
Strain : Lactobacillus rhamnosus LOCK900
Genome accession: NC_021723
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1296854 - 1297735 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
ATGCATGGGTTGATTGCTGATTTTATTCATTATCTGGATGTTGAGCGCGGGCTGGCCCGAACAACGCAGGTCAGCTATCA
GCAGGATTTAACCACCTTTATGGCGTGGTTAAGCGACCAAAAGCAAACAACTTTTCCTGAAGATTTTGGGGTTATTCAGG
CTTTTTTAAAGCATCAAAATGACACCAAAGCGCCTGCATCAGTCAGCCGAATGATTTCGGCGTTACGCAAGTTTTACCGG
TTCTTGTTACGCGAAGGCGCCATTAATTCTGACCCGATGACCAAAATCGATACCCCTAAAAAAGCACAACATTTACCGGC
CACATTATCAGGGACGGAAATTGATGCTTTGATGGCAAAGCCGGATACCACTAAGCCGTTGGGATTGCGTGATCGCGCTA
TTTTTGAGCTGATGTATGCGACTGGCTTGCGGGTATCGGAAGTTGTGGGATTGCGATTGGATCAGTTACATTTAGCAATG
AACTTGCTTCAGGTTACCGGAAAAGGCGATAAGGAGCGACTGGTTCCAATCAGTCCCCAAGCAGCCGATTGGGTTAACCG
TTATTTGCAGGAATCCCGTCCGCGTTTGATCAAACACCAGCAACCCAAGGCAGTGTTCGTCAACTTTCATGGTCATGCGC
TCACCCGTCAGGCAATTTGGAAGAATCTGAAAGCCTATATTGCAAGTGTTGGCATTGAAAAGGATGTAACACCGCATACG
TTACGGCACAGTTTTGCCACGCGCCTGTTGGAAAATGGCGCCGATTTACGGGTGGTTCAGGAGTTACTGGGGCATAGTGA
TATTAGTACCACCCAAATCTATACACATCTGAGTAATCAGCATCTAGTGGCGGTTTATCACAAAACCCATCCTCGTGGCT
AA

Protein sequence :
MHGLIADFIHYLDVERGLARTTQVSYQQDLTTFMAWLSDQKQTTFPEDFGVIQAFLKHQNDTKAPASVSRMISALRKFYR
FLLREGAINSDPMTKIDTPKKAQHLPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAM
NLLQVTGKGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQAIWKNLKAYIASVGIEKDVTPHT
LRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSNQHLVAVYHKTHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-57 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-57 42