Gene Information

Name : LOCK919_0489 (LOCK919_0489)
Accession : YP_008199057.1
Strain : Lactobacillus casei LOCK919
Genome accession: NC_021721
Putative virulence/resistance : Unknown
Product : Short chain dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 497109 - 497852 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence :
ATGATAAAAGACAAAGTTGTTGTGATTACAGGTGCATCTAGTGGTATCGGTGCTGAAACTGCTAAATTGCTCGCGAGTCG
AGGAGCCAAGGTTGTTCTTGGTGCTCGCCGTAAAGAGAAGTTAGAAAAACTGACTGATGAAATTAGAAATCAAGGGGGCC
AATCAATTTATCAAGTAACCGATGTTGTCAAACCAGAGGACAGTAAAAATCTTGTTCAGCTTGCTAAAAAAACATTCGGT
GGTATTGATGTGATGTTTCTTAATGCTGGCTTAATGCCCAGTTCACCACTTTCCGCTCTAAAAACAAATGAGTGGAATCA
AATTGTCGATGTTAACTTAAAGGGCGTTTTGAACGGGATTGCAGCAGCCCTACCATTTTTTAAAGCGCAACGATCGGGAC
ACTTTATTGCAACGAGTTCAGTAGCCGGTCTTAAAGCCTACCCAGATAATGCGGTTTACGGGGCAACAAAGTGGGCAGTG
CGTGAGCTTATGGAAGTGTTACGAATGGAATCGGCACAAGAAGGCAGTCATATCCGGACTGCCACTATCTATCCAGCGGC
CATTAAAACTGAGTTGTTAAATACGATTACTGACGAAGCTAGTGCCCAAGAGCTGAAGAAAACTTACGATACTTACGAAA
TTACGCCTGATCGAATTGCTAAGGTTGTTGAATTTGCAATTGATATGCCCGAAGACACAAACGTTAGTGAGCTTACAGTG
GGACCTACAATTCAACCTTGGTAG

Protein sequence :
MIKDKVVVITGASSGIGAETAKLLASRGAKVVLGARRKEKLEKLTDEIRNQGGQSIYQVTDVVKPEDSKNLVQLAKKTFG
GIDVMFLNAGLMPSSPLSALKTNEWNQIVDVNLKGVLNGIAAALPFFKAQRSGHFIATSSVAGLKAYPDNAVYGATKWAV
RELMEVLRMESAQEGSHIRTATIYPAAIKTELLNTITDEASAQELKKTYDTYEITPDRIAKVVEFAIDMPEDTNVSELTV
GPTIQPW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 2e-80 68
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 1e-44 46