|
Name : LOCK919_0368 (LOCK919_0368) Accession : YP_008198936.1 Strain : Lactobacillus casei LOCK919 Genome accession: NC_021721 Putative virulence/resistance : Virulence Product : Putative integral membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 367116 - 368402 bp Length : 1287 bp Strand : + Note : - DNA sequence : ATGGTTGTGGTTAACTTTATTATTCAAAATATTCTGACTCAGGCAGCCATCACCATTGCGTTAATCGCGATGCTGGGCTT GCTTCTACAACGCAAGTCCTTTGGCGCGGTCCTAACTGGAACCTTCAAGACACTGCTGGGATTTCAAGTATTATCAGCAG GGTCCGCCATTATTGTCACAGCACTGACGTATTTCGGAAAGATTTTTCAACATGGTTTTCACCTAAAAGGGGTTGTACCC AGCATTGAGGCGATCAATGGTCAAGCCATGAATACGCTGGGGTTGGGAAATGAAATTGCCTTAACCTTTTTGGGCATTTT CATTGTCAACATTATCATTGCGCGGTTCTCGCCATGGAAATATATTTTCCTAACCGGACAGGCGCTGTTGTGGATGTCGA CCATGACGGTTGTCGGCGGCAAGATAGCTGGCTTCAATTCAGTCGTGACCATTCTTGTTGGTAGTGTTATCGGGGGAATT TTCGCGGTGGCCATGCCAGCCATTGCGCAGCCTTTTGTTCGTAAGATTACCAAGGGCGATGCCATTGCTTTAGGACACTT TTGTACGATCGGCTACATGGTAGAAGCAGGCGCCGCTTGGATCTTCGGTGAACGTGGCGAAAAGAAACACTCGATTGAAG ACATCAAGTTACCAAAGTACATGGAATTCTTGCAAGACACGTATCTCTCTGTTGCTGTTGTGATGGTGCCATTGTTTATG ATCACCGCGGCTTTTGCAGGTCCTAAGTACGCCGGTAACGGCACGAGTCTGAACTATATCATGAATGCTTTCATGATGGG CATTCAGTTTGTTGTCGGGGTCTATGTCCTACTTGCAGGTGTTCGGCTCTTACTTGGTGAAATCGTTCCGGCTTTCCGTG GTATTGCGATGAAACTGGTACCAAATGCGAAACCAGCACTTGACTGTCCAGTCTTGTTCCCATTCTCACCAAACGCGGTC ATCTTAGGCTTCATTACGACAACCATTGGGACCGTCATTGGCATGTTCTTGATGCCTGTTTTCGGACTCGCGGTCATTCT GCCGGGGATGTTAACTAACTTCTTCGCTGGCGGGACTGCAGGGATCTTCGGAAACGTTGTCGGCGGCCGCCGCGGGGCCA TCATTGGCGGCATTATCCACGGCCTGTTCATCACCTTGTTGCCAGCGCTGCTAGTAACGGCTTTGACCTCGTTTGGCTTC GTGAATGCTTCGGCAACTGACTCCGATACGATCGTGGCCATGCTGATGTATGCCTGGATCCTAACGCCGATTCTTAAAGC AGTTTAA Protein sequence : MVVVNFIIQNILTQAAITIALIAMLGLLLQRKSFGAVLTGTFKTLLGFQVLSAGSAIIVTALTYFGKIFQHGFHLKGVVP SIEAINGQAMNTLGLGNEIALTFLGIFIVNIIIARFSPWKYIFLTGQALLWMSTMTVVGGKIAGFNSVVTILVGSVIGGI FAVAMPAIAQPFVRKITKGDAIALGHFCTIGYMVEAGAAWIFGERGEKKHSIEDIKLPKYMEFLQDTYLSVAVVMVPLFM ITAAFAGPKYAGNGTSLNYIMNAFMMGIQFVVGVYVLLAGVRLLLGEIVPAFRGIAMKLVPNAKPALDCPVLFPFSPNAV ILGFITTTIGTVIGMFLMPVFGLAVILPGMLTNFFAGGTAGIFGNVVGGRRGAIIGGIIHGLFITLLPALLVTALTSFGF VNASATDSDTIVAMLMYAWILTPILKAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 1e-59 | 44 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 1e-59 | 44 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 1e-59 | 44 |
