Gene Information

Name : LOCK919_1880 (LOCK919_1880)
Accession : YP_008200391.1
Strain : Lactobacillus casei LOCK919
Genome accession: NC_021721
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1840410 - 1843055 bp
Length : 2646 bp
Strand : -
Note : -

DNA sequence :
ATGGCGAGCAAAACAAAATTATTATTAGTCGATGGTAACTCAGTCGCATTTCGTGCATTTTTTGCTTTATATAATCAATT
AGACCGTTTTACGAACCAAGATGGCTTGCACACCAACGCCATTTATGCGTTTAACAACATGCTCGAGATTGTTTTAAAGG
CAGTCCAACCAGATGCCGCTTTAGTAGCATTTGATGCAGGCAAGACGACTTTTCGCACAGCCAAATATGCTGATTACAAA
AGTGGTCGCGCCAAGACACCGAGCGAATTGCTGGAACAATTGCCTTATATCAAGGAATTGTTGGATGACATGGGCATCGC
GCATTATGAATTAAAGGATTACGAAGCCGATGACATTATCGGCACAATGGCTAAGCGTGCGGATGAGGCCGGCTGGGAAA
CGACGATTGTCACTGGTGATCGCGATTTGACGCAGCTGACGACCGATCGGACCACAGTTCAAGTGACAGTGAAGGGTGTC
AATGAGCTTGAAGCTTACACCCCAGCACATGTCAAAGAAAAGCTTGGCATCACACCGGCTCAAATTATTGATCTCAAAGG
TTTGATGGGTGATACCTCGGACAACTATCCTGGGGTGACCAAGGTCGGTGAAAAAACAGCTCTGAAATTGCTCAATCAAT
ACGGAAGCATGGAAAACCTCTATGCTAATGTGGATGACATGAAAAAGAGCAAGCTTAAAGAGAATTTGATCAACGATAAA
GATAACGCTTTCTTAAGCAAACAGTTGGCAACGATTGATCGCGATGCACCGCTTACTGTGGACTTAGCGGATGTGACATA
TGCTGGACCGGATTTAGACAAACTCCGGGACTTCTATACAAAAATGAATATGAATTCGTTGCTCAAAAAAATCGGTGGTA
GTGTCGCTAAACCTGTTCAGGCGGTTCATTTTTCCGTGCTGGATGAGCAATCGATTCTTGCGCTCACCAAACTGACCGAA
CCGCTGACTTTTGAGATTGAAATGCTCGAGGATAATTATCATGTGGCCGAACAAATCGGTTTCTTTATTGGCACTAAGGA
AGAAACTTACGTGAGTACCGATGTCACCTTGCTGACGCTGCCAGCGGTTAAACGGTGGCTGGAAGATGCCAAACGTGATC
TGACAGTTTTTGACGGCAAACGAAACATCGTCGCCGCCAATCGACTCGGCGTGAAATTACCGGATATCGCTTTTGACGTG
TTATTAGCGTCCTATTTGATTAATCCTGACGAAAACAGCAATGATTTGGGTAAAATCGCTGAAGATCACGATTATCATGA
CTTGCCGCGTGATGAGGATATTTATGGCAAAGGCGCCAAACGGCAAGTGCCAGAAGACGATAAGCTGTTTGGCCAGTTTG
CTCGCAAGTCTGATGCTTTGTTCGCATTGCGGCCTGATTTGACTGGCGATTTGGAAAAACAGGCCCAAACAGACTTATTC
ACTGATATGGAAATGCCGCTTTCTCGGGTTTTGGCAGAAATGGAAATTCAAGGGATTACCCTAAATGCTAAAACACTGAA
GGCTATGGGCACTGAATTCTCACAAAGCATCAAGATTTTGGAAGAGAAAATCTATGCAGAAGCTGGCGTGAAGTTCAATT
TGAACTCACCAAAGCAGCTCGGCGAAATTCTTTTTGAAAAATTGAATCTGCCTGTGATCAAGAAAACGAAGACCGGTTAC
TCGACAAGCGTTGACGTGTTGAACGAATTGAAATCGGCAAGTCCGATTGTGCAGGACATTTTGGATTATCGCGGCTGGGC
AAAATTGAATTCGACTTATGTTGTCGGCTTGTTGAAGGCGCAATTGCCTGATCATAAGATTCATACCCGCTATTTGCAGA
CTTTGACGCAAACTGGCCGATTGAGCTCAGTTGATCCTAACATGCAGAATATTCCTGCTCGTGATGAAGGTAAGATTATT
CGCAAGGCCTTTGTACCGTCACATGAAGGTTGGCAAATTTTTAGTTCTGACTATTCCCAAATTGAGTTGCGGGTGTTGTC
GCATATTTCCGGGGATGAGAATATGCAGGAGGCGTTTAAACATGGCGTCGACATTCACGCCAACACTGCGATGAAGATTT
TTGGCCTGAGTTCGCCAGATCAAGTCACACCTGATATGCGGCGGCAAGCCAAGGCAACTAACTTCGGTATTGTGTATGGC
ATTAGTGACTATGGTCTATCCCAAAACATTGGCATTTCCCGTAAACAGGCAAAAGCGTTCATTGATGGTTATTTTGATCA
ATATCCTAAGGTTCATGATTATATGGATGCGATGGTCAAGAAGGCGCGTGAAGACGGCTATGTCGAAACCCTGTTCCATC
GGCGGCGCTATCTGCCACAAATTCACTCACGCAACTTCAATCTGCGTAAGTTTGCCGAGCGGACCGCTATGAATACGCCG
ATTCAGGGTAGCGCTGCGGATATTATCAAGGTAGCCATGATTCGCATGCAAAAGGCCTTGGATGAGGCCGGTTTGCAAGC
TAAAATGCTTCTACAGGTTCACGATGAACTCATCTTCGAGGCACCTGAAGAAGAAATTGTCCAGCTTAGCGAGCTCGTGC
CCAAAGTCATGGACTCAGCAGTTCACCTTGATGTGCCATTAAAGGTTGAAAGTCATTATGGACCAACTTGGTTCGACGCT
AAATAA

Protein sequence :
MASKTKLLLVDGNSVAFRAFFALYNQLDRFTNQDGLHTNAIYAFNNMLEIVLKAVQPDAALVAFDAGKTTFRTAKYADYK
SGRAKTPSELLEQLPYIKELLDDMGIAHYELKDYEADDIIGTMAKRADEAGWETTIVTGDRDLTQLTTDRTTVQVTVKGV
NELEAYTPAHVKEKLGITPAQIIDLKGLMGDTSDNYPGVTKVGEKTALKLLNQYGSMENLYANVDDMKKSKLKENLINDK
DNAFLSKQLATIDRDAPLTVDLADVTYAGPDLDKLRDFYTKMNMNSLLKKIGGSVAKPVQAVHFSVLDEQSILALTKLTE
PLTFEIEMLEDNYHVAEQIGFFIGTKEETYVSTDVTLLTLPAVKRWLEDAKRDLTVFDGKRNIVAANRLGVKLPDIAFDV
LLASYLINPDENSNDLGKIAEDHDYHDLPRDEDIYGKGAKRQVPEDDKLFGQFARKSDALFALRPDLTGDLEKQAQTDLF
TDMEMPLSRVLAEMEIQGITLNAKTLKAMGTEFSQSIKILEEKIYAEAGVKFNLNSPKQLGEILFEKLNLPVIKKTKTGY
STSVDVLNELKSASPIVQDILDYRGWAKLNSTYVVGLLKAQLPDHKIHTRYLQTLTQTGRLSSVDPNMQNIPARDEGKII
RKAFVPSHEGWQIFSSDYSQIELRVLSHISGDENMQEAFKHGVDIHANTAMKIFGLSSPDQVTPDMRRQAKATNFGIVYG
ISDYGLSQNIGISRKQAKAFIDGYFDQYPKVHDYMDAMVKKAREDGYVETLFHRRRYLPQIHSRNFNLRKFAERTAMNTP
IQGSAADIIKVAMIRMQKALDEAGLQAKMLLQVHDELIFEAPEEEIVQLSELVPKVMDSAVHLDVPLKVESHYGPTWFDA
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 54