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Name : LOCK919_1124 (LOCK919_1124) Accession : YP_008199643.1 Strain : Lactobacillus casei LOCK919 Genome accession: NC_021721 Putative virulence/resistance : Unknown Product : tmRNA-binding protein SmpB Function : - COG functional category : - COG ID : - EC number : - Position : 1102318 - 1102791 bp Length : 474 bp Strand : + Note : - DNA sequence : ATGGCGAAGAAACATCGACAAAAACCTGACAACCTGCTCGCCCAGAATAAAAAGGCCGGTCATGATTACAACATTCTTGA TACCTACGAAGCCGGTATTGCGCTGACAGGTACCGAAATCAAATCCGTGCGTGATGGCAAGCTGAATTTGCGTGACGGCT TTGCCCGAATTCGGAATAATGAGGCGTGGTTAGAAAACGTCCACATTAGTCCGTATAAAGAGGGCAATTTATTCAACGTT GACCCAATGCGTAATCGCAAGCTGCTCCTGCACAAACGAGAAATTCGCAAGTTAGGTCAAATGACAGCGCGCCAAGGTGT CACGCTTGTGCCGTTGCGGATGTATTTAAAACACGGCTATGCCAAGGTTTTGATTGGTGTGGCTGAAGGGAAGCATAACT ACGACAAACGTGAAACCTTAAAGCGCAAGGATCAGGAACGCGAGGTTCAGCGCGCTTTGAAGGCACGGTATTAA Protein sequence : MAKKHRQKPDNLLAQNKKAGHDYNILDTYEAGIALTGTEIKSVRDGKLNLRDGFARIRNNEAWLENVHISPYKEGNLFNV DPMRNRKLLLHKREIRKLGQMTARQGVTLVPLRMYLKHGYAKVLIGVAEGKHNYDKRETLKRKDQEREVQRALKARY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 8e-39 | 63 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 2e-30 | 48 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 5e-21 | 41 |
