Gene Information

Name : I876_04565 (I876_04565)
Accession : YP_008195329.1
Strain : Alteromonas macleodii Ionian Sea U7
Genome accession: NC_021717
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1065547 - 1068138 bp
Length : 2592 bp
Strand : -
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGATGCGCCAATATTTAAGCATAAAGGCGCAACATCCGAATATTCTACTTTTTTATCGCATGGGCGATTTTTACGAGTT
ATTTTATGACGATGCCAAAAAAGCTGCTGAATTACTGGACATTTCGCTTACGGCGCGAGGTAAATCGGGTGGCGAGCCCA
TTCCCATGGCAGGCGTGCCTTATCATGCGGTAGAAAGCTACCTATCGCGTTTAGTAAAAATGGGGGAGTCGGTTGCCATT
TGTGAACAAGTTGGCGACCCAGCGACGAGCAAAGGCCCCGTTGAGCGTGCCGTACAGCGCATTGTTACGCCGGGCACTGT
AACCGACGAAGCTTTATTAGAAGAGCGTCGCGACAATATTCTTGCCGCTGTGTGCGGCCATAGCATGCATTATGGGTTAG
CCACATTAGATGTAACTAGCGGTCGCTTTGTGGTGTTCGAGTGCGATAGTGATGAAAGCTTACTGGCTGAAATTCAGCGC
ATTAACCCGGCTGAGTTACTTTACCCTGAAGGCTTTGAAAGCCTGTCTCTTGTTGAAAATCGCAAAGGGCTACGCAGGCG
TCCCGAGTGGGAATTCGACGTAGATACTGCAAATGAACAGCTTAACGCCCAGTTTGAAACTAAAACATTAGATGGCTTTG
GTATAAAAGGCGTCACTAAAGGATTAGGCGCAGCAGGTTGTGTTTTACAATATGTAAAAGATACCCAGCGCACTGCCCTG
CCCCACATTCGCCGCATTCAGACTGAACAGCAAGACAGCCGTGTTCAGCTTGATGCCGCAACGCGCAGAAACCTGGAACT
TACCCATAATTTGTCTGGCGGTCAGGAAAATACCCTGTTCAGCGTAATGGACACTACCACCACGGCCATGGGCAGTCGTA
TGTTACAGCGAATCATTCACTCGCCGCTGACCGACCAGCATGAGCTCCAAAGCCGCTTAGACGCAATAGACACCTTTATT
AATGACGATCCTGAAGATATCCGCAATGCGCTAAAACACATTGGCGACATAGAGCGTATTATGGCGCGTTTAGCCCTTCG
CTCGGCGCGCCCTCGGGATTTTGCACGTTTAAAAAATGCGTTTAATGCACTGCCTGATTTGCAAGATGCTCTTGCCCGTT
TTGACACAGGACAAATTAGAAGTATTGGCGAAACCATTGGCACTTACCCTGAGCTTCAAGCCCTGTTAAACAGCGCTATA
ATCGATAATCCACCAGTTGTTATACGCGATGGTGGCGTAATTGCCGAAGGCTATAATGCTGAACTGGATGAACTGCGCAA
ACTATCACAAGGTGCTACCGACTACTTAGATGCGATGGAGCAACGTGAGCGTGAACGCACAGGCATTTCTACGCTAAAAG
TGGGCTATAACAAAGTGCACGGTTTCTTCATTGAAATTAGTCGTGCTAACAGCGCTTTGGCCCCCGCCGAATACATTCGA
AGACAGACCCTTAAGAACACCGAACGTTATATTACGCCTGAGCTTAAAGAACACGAGGACAAAGTGCTAAGTAGCCAAGG
GGCTGCACTTGCCCTTGAAAAACAGCTTTATGAAGCCTTGTTTGACAATTTTGCGCCATACCTCAACAAGTTAATTGAAA
CCGCCGCAGCGCTTGCCAAGCTTGACGTGCTGTGCTGTTTTGCCGAACGCGCGGTATCGCTCGATTGGCATCGGCCAAAA
TTGAGCCAAGAATGTGCGCTTACTTATGATGCCGGTCGCCACCCTGTGGTTGAGAACGTGATGAAAGACCCCTTCATTGC
CAACCCACTGCAACTGGATACTGAGCGCCGTATGCTCGTTATTACCGGCCCAAACATGGGCGGTAAATCGACCTACATGC
GTCAAACAGCGCTTATTGCTTTATTGGCCTGCATCGGCAGTTATGTGCCTGCTGAAAACGCCCACATCGGCAAGCTGGAT
CGCATATTCACCCGGATTGGCGCATCAGATGACCTGGCCTCTGGCCGCTCAACCTTCATGGTTGAAATGACCGAAACGGC
AAATATTCTTAATAACGCGACTGAAAACTCACTGGTGTTAATGGATGAAATTGGCCGTGGTACCAGCACCTACGATGGCT
TATCGCTGGCATGGGCTTGCGCGAGCTACCTCGCGAAGCAACTCAACGCCTACACCCTTTTTGCGACCCACTATTTTGAG
CTGACCGAGCTACCCGAAACGCAAGCGGGCGTTGTGAACGTGCATCTTAATGCGATGGAGTTTGAAGACACCATTCGCTT
TATGCATACCGTATCTGAAGGCGCCGCGAACAAGAGCTTTGGTTTACAGGTTGCACAACTTGCTGGTGTACCAAAACCTG
TGATTAAAGCCGCTCAGCAAAAGCTCGCTATTTTAGAATCATCACACGTCATGACCAGTGATGAATCAAGGGGCAGTGAC
ACTTCGCAAGCGCAAAGCAACACCTCCAGAAAAATTGACAACAGTTCAAATGCGAAAGGACAAGCAGAAATGCTTTTTCC
AGACAAACCGCACCCCGTGGTGGAAGCGCTTGAAAACTTATCGCCCGATGAGCTATCTCCTCGCCAAGCGCTCGACCTCA
TCTACACCCTTAAACGCTTAAGTCAATCGTAA

Protein sequence :
MMRQYLSIKAQHPNILLFYRMGDFYELFYDDAKKAAELLDISLTARGKSGGEPIPMAGVPYHAVESYLSRLVKMGESVAI
CEQVGDPATSKGPVERAVQRIVTPGTVTDEALLEERRDNILAAVCGHSMHYGLATLDVTSGRFVVFECDSDESLLAEIQR
INPAELLYPEGFESLSLVENRKGLRRRPEWEFDVDTANEQLNAQFETKTLDGFGIKGVTKGLGAAGCVLQYVKDTQRTAL
PHIRRIQTEQQDSRVQLDAATRRNLELTHNLSGGQENTLFSVMDTTTTAMGSRMLQRIIHSPLTDQHELQSRLDAIDTFI
NDDPEDIRNALKHIGDIERIMARLALRSARPRDFARLKNAFNALPDLQDALARFDTGQIRSIGETIGTYPELQALLNSAI
IDNPPVVIRDGGVIAEGYNAELDELRKLSQGATDYLDAMEQRERERTGISTLKVGYNKVHGFFIEISRANSALAPAEYIR
RQTLKNTERYITPELKEHEDKVLSSQGAALALEKQLYEALFDNFAPYLNKLIETAAALAKLDVLCCFAERAVSLDWHRPK
LSQECALTYDAGRHPVVENVMKDPFIANPLQLDTERRMLVITGPNMGGKSTYMRQTALIALLACIGSYVPAENAHIGKLD
RIFTRIGASDDLASGRSTFMVEMTETANILNNATENSLVLMDEIGRGTSTYDGLSLAWACASYLAKQLNAYTLFATHYFE
LTELPETQAGVVNVHLNAMEFEDTIRFMHTVSEGAANKSFGLQVAQLAGVPKPVIKAAQQKLAILESSHVMTSDESRGSD
TSQAQSNTSRKIDNSSNAKGQAEMLFPDKPHPVVEALENLSPDELSPRQALDLIYTLKRLSQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I876_04565 YP_008195329.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 63