Gene Information

Name : I876_18875 (I876_18875)
Accession : YP_008198140.1
Strain : Alteromonas macleodii Ionian Sea U7
Genome accession: NC_021717
Putative virulence/resistance : Virulence
Product : type II secretory pathway, ATPase PulE-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4290449 - 4292008 bp
Length : 1560 bp
Strand : +
Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

DNA sequence :
ATGGCGGATGAACAACTTACTCAAGCACTAGAGGCCCAAGAAGAAGCCCTAGAAGCCATGGGTGATGACGCCGGCGTACC
TGAAGCAGAGGCCGGCCCTAAGCAGCTCTCTTTTAGCTTTGCTAAGCGCAACCAGGTGCTGCTTGAAACCAACGAAACGC
CAGCGGTGCTGTATTTTACAGAAAACACGCCGTTTGACGTGTTTGCAGAAGTGCGTCGCTTCTACGGCGAGCCTTTTGTA
CCGAAAACTATACCCGCTGACGAATTTGAAAACTTACTGACTAGTGCGTTTCAGCGCGATAGTTCTGCAGCGAAGCAGTT
AATGGAAGACTTAGGCAACGAAAGCGACTTATTCGCCCTTGCAGAAGACTTACCCGACACTGAAGACCTGCTAGATAGCG
AAGACGACGCCCCTATTATCAAGCTTATTAACGCCATGCTAGGTGAGGCAATTAAAGAAGGCGCGTCAGATATTCATATC
GAAACGTTTGAAAACCAGCTTGTGGTTCGCTTTCGGGTAGACGGTGTGTTGCGGGAAATTTTGCGCCCCAATCGCAAGCT
TAGCTCTATGCTGGTATCGCGTATAAAAGTAATGGCCAAGCTAGATATTGCAGAAAAACGCGTCCCCCAGGATGGCCGTA
TTACGCTGCGTATTGCCGGGCGAGCGGTAGACGTTCGTGTTTCGACGATGCCCTCTAGCCACGGCGAGCGAGTGGTACTG
CGTCTTTTAGACAAAAACAACGCCCGCTTGAACCTAGAAGATTTGGGCATGACGCTGCAAAACCGTAACCATTTCTCGAC
GTTAATACGAAAACCACACGGTATTATTTTGGTTACTGGCCCTACCGGTTCCGGTAAAAGTACCACCTTGTACGCAGGGC
TTACCGAGATAAACTCCCGCGATAGGAATATTTTAACGGTAGAAGATCCTATCGAATTCGACCTGCCAGGCATCGGACAA
ACGCAGGTTAACCCCCGTGTAGACATGACCTTTGCACGAGGCCTTCGCGCAATTTTGCGTCAAGACCCCGATGTTGTCAT
GGTCGGTGAGATTCGTGATATCGAGACTGCGCAAATTGCCGTTCAGGCCAGTTTAACCGGTCACTTAGTGCTTTCTACCC
TGCATACTAACACCGCCGCTGGCGCCATTACTCGCTTAGAAGACATGGGCATAGAGCCTTTCCTTTTATCTTCCAGTTTA
TTGGCAGTACTGTCACAGCGACTCGTTCGTACGCTATGCCCAGACTGTAAAAAGCCGCATACGCCGGATGCGTCTGAACT
TGAAATATTAGGCCAAGGGGCCACCAGCAGCACCACAATTTACAAACCTCACGGCTGTGCAGCGTGTAACCAGACCGGCT
ATCGCGGGCGTACGGGTATTCACGAATTGCTTTTAGTTGATGAAAAAGTGCGTGAAATGATGCACGAAGGTGTCGGCGAA
CAAGCCATTGAGCGCTACATCAGAACCTCTACCCCAAGCATCCGTGAAGATGGCTGTAGTAAAGTGCTTATCGGTGAAAC
CTCTCTTGAAGAAGTGCTTCGAGTAACGAGGGAAGACTAG

Protein sequence :
MADEQLTQALEAQEEALEAMGDDAGVPEAEAGPKQLSFSFAKRNQVLLETNETPAVLYFTENTPFDVFAEVRRFYGEPFV
PKTIPADEFENLLTSAFQRDSSAAKQLMEDLGNESDLFALAEDLPDTEDLLDSEDDAPIIKLINAMLGEAIKEGASDIHI
ETFENQLVVRFRVDGVLREILRPNRKLSSMLVSRIKVMAKLDIAEKRVPQDGRITLRIAGRAVDVRVSTMPSSHGERVVL
RLLDKNNARLNLEDLGMTLQNRNHFSTLIRKPHGIILVTGPTGSGKSTTLYAGLTEINSRDRNILTVEDPIEFDLPGIGQ
TQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDIETAQIAVQASLTGHLVLSTLHTNTAAGAITRLEDMGIEPFLLSSSL
LAVLSQRLVRTLCPDCKKPHTPDASELEILGQGATSSTTIYKPHGCAACNQTGYRGRTGIHELLLVDEKVREMMHEGVGE
QAIERYIRTSTPSIREDGCSKVLIGETSLEEVLRVTRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-151 65
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-151 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I876_18875 YP_008198140.1 type II secretory pathway, ATPase PulE-like protein VFG0182 Protein 6e-144 65
I876_18875 YP_008198140.1 type II secretory pathway, ATPase PulE-like protein VFG2048 Protein 3e-150 64
I876_18875 YP_008198140.1 type II secretory pathway, ATPase PulE-like protein VFG1876 Protein 1e-130 57
I876_18875 YP_008198140.1 type II secretory pathway, ATPase PulE-like protein VFG2426 Protein 2e-72 48
I876_18875 YP_008198140.1 type II secretory pathway, ATPase PulE-like protein VFG1880 Protein 1e-79 45