Gene Information

Name : I876_16970 (I876_16970)
Accession : YP_008197763.1
Strain : Alteromonas macleodii Ionian Sea U7
Genome accession: NC_021717
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3874053 - 3875228 bp
Length : 1176 bp
Strand : -
Note : COG1004 Predicted UDP-glucose 6-dehydrogenase

DNA sequence :
ATGAGCAATTACAAAATAGCGGTGGCAGGTACTGGATACGTAGGCTTATCAAACGCCGTGCTACTAGCACAACACAATGA
AGTGAAAGCGGTCGACTTGGTAGCAGAAAAAGTTGAGATGCTTAATAATAAAAAGTCTCCCATTGAAGACAAAGAGATTT
CAGAATATCTTGCGACTAAAGAGCTTAACCTTGAAGCCACGTTAGATGCACATTTAGCATATAAAGATGCGGATTACGTT
ATTATTGCCACGCCTACTGACTACGACCCGCAAACTAACTACTTTAATACGGGTAGTGTAGAGGCGGTTATCAAAACGGT
AATGGAAATTAACCCTAATGCAGTGATGATTGTTAAATCGACTGTGCCAGTAGGGTTCACTAAAGACGGAAAAGCACGTT
TCGGTACTGAAAATCTAATCTTCTCTCCAGAGTTCTTACGTGAAGGTAAAGCACTTTACGATAACCTTCACCCTAGCCGC
ATTATTGTGGGTGAACGTAGCGAACGCGCTGAAGTATTCGCTAAATTGCTTCAGCAAGGCGCGATTAAAGAAGAAATCGA
AGTGTTATTTACTGACAGCACTGAGGCTGAAGCCATTAAGCTATTCGCTAACACTTACTTAGCGATGCGTGTTGCTTATT
TCAACGAGTTGGATAGCTATGCTGAACGAAATGGCTTAGACACCAAACAAATTATTGAAGGTGTAGGCTTAGACCCTCGT
ATTGGTAAGCACTACAATAATCCAAGCTTTGGTTACGGTGGTTACTGCCTACCAAAAGATACTAAACAATTGTTGGCTAA
CTACAGTGAAGTGCCTAACAACATGATTCAGGCTATTGTAGATGCTAACCGTACCCGTAAAGACTTTATTGCCGATTCAA
TTGTAAGCCGTGGCCCAAAGATTGTTGGTATCTACCGCCTTATCATGAAGACTGGTTCTGACAACTTCCGCGCCAGTGCA
ATTCAGGGCATCATGAAGCGCATTAAAGCGAAAGGTATCGAAGTGGTAGTATACGAGCCAGTACTTAAAGAAGATGACTT
CTTTAATTCACGTGTAGTAAACGATTTAGAAGAGTTTAAGAAAATCTCTGATGTTATCGTCGCCAACCGTGTAACGGGCG
ATATCGAAGACGTACTTGAAAAAGTATATAGCCGCGACTTGTTCAACGCCGATTAA

Protein sequence :
MSNYKIAVAGTGYVGLSNAVLLAQHNEVKAVDLVAEKVEMLNNKKSPIEDKEISEYLATKELNLEATLDAHLAYKDADYV
IIATPTDYDPQTNYFNTGSVEAVIKTVMEINPNAVMIVKSTVPVGFTKDGKARFGTENLIFSPEFLREGKALYDNLHPSR
IIVGERSERAEVFAKLLQQGAIKEEIEVLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAERNGLDTKQIIEGVGLDPR
IGKHYNNPSFGYGGYCLPKDTKQLLANYSEVPNNMIQAIVDANRTRKDFIADSIVSRGPKIVGIYRLIMKTGSDNFRASA
IQGIMKRIKAKGIEVVVYEPVLKEDDFFNSRVVNDLEEFKKISDVIVANRVTGDIEDVLEKVYSRDLFNAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-94 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I876_16970 YP_008197763.1 nucleotide sugar dehydrogenase VFG0963 Protein 5e-102 55