Gene Information

Name : I876_12845 (I876_12845)
Accession : YP_008196951.1
Strain : Alteromonas macleodii Ionian Sea U7
Genome accession: NC_021717
Putative virulence/resistance : Unknown
Product : ClpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2922048 - 2924624 bp
Length : 2577 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAGATTAGATAGATTTACCAGCAAATTTCAGCTCGCTATATCCGATGCTCAATCACTCGCATTGGGGCGCGACCACCA
ATATATTGAACCGGTACACTTGATGACGGCAATGCTTAATCAGCAAGGCGGCTCAGTGCGACCATTGCTCGATCAAGCTA
ATATCAATGTTAACGCGTTACGTTCTGCACTGAGTCAAGCAATTGAGCGCTTGCCACGAATTGAAGGCATTGGTGGCGAT
GTTCAGTTAAGCAAAGACAGCGGCATATTACTAAACCTTTGCGACAAAATAGCGCAGCAGCGAAAAGATGAATATATCAC
TTCTGAAATCTTTGTGCTTGCTGCCCTTGAAGACAAAGGGCGGTTGGGTGAAATTCTCAAGAGCTTAAATATTACCAAAG
ATGCTATTGAAAGCGCGATAGACGATATGCGCGGTGGTCAAAAAGTAACGGACCCTAATGCCGAAGACGTCCGCCAAGCA
TTAGAAAAATATACAACCGATTTAACCGAACGCGCAGAGCAGGGCAAGCTTGACCCTGTCATTGGGCGCGACGATGAAAT
TCGCCGAACTGTTCAGGTACTACAGCGTAGAACAAAAAATAACCCCGTGCTTATTGGTGAGCCTGGCGTAGGTAAAACTG
CCATTGTTGAAGGCCTCGCACAGCGTATTATCAATGGCGAAGTGCCCGAAGGACTTAAAAACAAGCGCGTGCTTTCCCTA
GATATGGGGGCACTTGTCGCTGGTGCCAAATATCGCGGCGAGTTCGAAGAAAGGTTGAAAGCGGTGCTAAATGAACTTGC
CAAAGAAGAAGGCCGCGTTATTTTATTCGTTGATGAACTGCACACCATGGTAGGAGCAGGGAAGGGCGATGGCGCTATGG
ACGCAGGCAATATGCTTAAGCCAGCATTAGCCCGCGGTGAACTTCACTGTGTAGGCGCCACCACGCTGGATGAATATCGC
CAATATATCGAAAAAGATGCAGCCCTTGAGCGACGCTTCCAAAAAGTATTGGTAGAAGAGCCTAGCGTTGAAGATACTAT
CGCTATATTGCGAGGTCTAAAAGAGCGTTATGAACTCCATCACTCTGTGGATATTACCGACCCAGCCATTGTAGCGGCGG
CAAGTTTATCTCATCGTTATATTAGTGATCGCCAGCTTCCAGACAAGGCAATAGACCTTATCGATGAAGCGGCATCGAGT
ATACGTTTACAGATCGACTCTAAGCCAGAAGATATGGACCGTTTAGAGCGCCGTATTATACAGCTAAAATTGGAAGAACA
GGCGCTTGCAAAAGAAACCGATGATGCCAGCCATAAACGCCTGGAGATGATTGAACTAGAGCGTGAGCAAGCTGAGACTA
AATACGCTGAACTTGAAAAAGTATGGCTAGATGAAAAAGATGCGATGCAAGGAACGCAAACCATAAAAGGTGAGCTAGAG
CAAGCAAAACTTGATTTAGAAATCGCGCGAAGAGCCTCTGATCTCAACCGCATGTCTGAACTTCAATATGGTCGTATACC
AGAATTAGAAGCAAAGCTAGAGCAGGCTGCGGAAAACGAGACTCGCGAAACCACATTGCTTAAAAACAAAGTAACCGATG
TTGAAATTGCCGATGTACTTTCTCGGTGGACCGGTATTCCTGTGGCCAGAATGCTAGAAGGAGAGCGCGAGAAGTTATTA
CGCATGGAAGATGTGCTGCACAAGCGGGTGGTTGGTCAAGAAGAAGCCGTTCAATCAGTTTCTAATGCAATTCGTCGCTC
ACGTGCTGGACTCGCTGACCCGAATCGCCCCATTGGTTCGTTCCTATTTTTAGGGCCAACTGGCGTTGGTAAGACTGAGC
TGTGCAAAGCTTTGGCTGGCTTTATGTTCGACACTGAAGATGCCATGATACGGATAGATATGTCGGAATTCATGGAAAAG
CATTCGGTTGCGCGTCTTGTTGGTGCACCTCCAGGTTACGTCGGGTATGAGGAAGGTGGCTACTTAACAGAAGCGGTACG
TCGCAAACCTTATTCGGTTATTCTACTCGATGAAGTGGAAAAGGCGCACCCTGATGTTTTCAATATTCTGTTACAAGTGC
TAGATGACGGAAGGCTTACAGATGGGCAAGGTCGCACGGTAGACTTTAAAAACACGGTCGTGATCATGACTTCTAACTTA
GGCTCAGACATCATTCAAGATAAGCACAGTGAAAGCCAGTACGACGAAATGAAGGGGATGGTAATGAATGTTGTAGGGCA
ACATTTCAGACCTGAGTTCATTAACCGTGTGGATGACATTGTGGTATTCCACCCACTAGGGAAAGAGCAAATTAAGTCTA
TTGCTAAAATTCAGCTCGCTTCTCTGAGAGCCAGATTGGCAGACAAAGGTTACAAACTTACTCTGTCTGCTGCGGCAATG
GATAAGCTGGCTGAAGCGGGCTTTGACCCTGTATTTGGCGCTCGACCGCTTAAGCGCGCTATTCAAGTGCAGGTGGAAAA
TCCGCTCGCCCATCAGCTGCTTGCTGGTGAGCTGATACCCGAATCGACCGTTCGAATAGATGCAGACGAGAGCGGGCTCT
TTATAGTTAGCAACTAA

Protein sequence :
MRLDRFTSKFQLAISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQANINVNALRSALSQAIERLPRIEGIGGD
VQLSKDSGILLNLCDKIAQQRKDEYITSEIFVLAALEDKGRLGEILKSLNITKDAIESAIDDMRGGQKVTDPNAEDVRQA
LEKYTTDLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSL
DMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS
IRLQIDSKPEDMDRLERRIIQLKLEEQALAKETDDASHKRLEMIELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELE
QAKLDLEIARRASDLNRMSELQYGRIPELEAKLEQAAENETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREKLL
RMEDVLHKRVVGQEEAVQSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMIRIDMSEFMEK
HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNL
GSDIIQDKHSESQYDEMKGMVMNVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLADKGYKLTLSAAAM
DKLAEAGFDPVFGARPLKRAIQVQVENPLAHQLLAGELIPESTVRIDADESGLFIVSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-101 42