Gene Information

Name : I876_10625 (I876_10625)
Accession : YP_008196519.1
Strain : Alteromonas macleodii Ionian Sea U7
Genome accession: NC_021717
Putative virulence/resistance : Unknown
Product : phage integrase family site specific recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2409169 - 2410359 bp
Length : 1191 bp
Strand : -
Note : COG0582 Integrase

DNA sequence : 
ATGCCACGGAACGTAACCGCTTTAAGCGCAACCCAAGTAAAACAAGCAAAACCTAGAGATGCGGAATACAACCTGTCAGA
TGGAAAAGGGCTTGCATTACGCATTAAACCAAACGGATCGAAGCTTTGGATATTTAACTATTCGAAACCTCACACTAAAA
AGCGAAGTAATATCGGTATAGGCAGTTATCCCGATGTTTCTCTTGCAGATGCCCGAGAGCATCGCGAAGCGTTCAGGAAG
TTGCTGGCGAAGGATGTCGACCCTAAAGAGCATAAAGATCACGAAAAAGAAAAGGCATTGTTTTCAGCCTCGCAAACTTT
TGAGAGCGTTGCGAAGCAATGGTTTGAAATTCATGCCAGCAAAGTTTCAGAAGGAACGCTGAAAAATATCAAGCGCTCTT
TTTCTAATGATGTTTTTCCACTAGTTGGTAGAGTTCCTATTGAGCAATTAACAGCGCCTAAAGCAATAGAAGTAATAAAC
GCAATAGTGGGGCGAAATAGTCACGAAATAGCGCGTAAAGTTGCTAGGCGTATGAATAGCGTTATGACTTACGCTGTTAA
TGCCGGAATTATCCACCACAATCCGCTTATAGGTATTAAAGAGTTAATACCTTCGACGAAGGTTAAGCACCAACCCACGT
TACAGCCCGAAGAACTACCCGAGCTTGTTAAAGCTCTAAAATATTCGTCCGCCAAAATAACTACCCGGTGTTTAATTGAG
TTTCAGTTACATACCATGGTTCGCCCAGGTGAAGCAGCCGAGGCGAAATGGTCAGAAATAGATTTTTCACAATCTATCTG
GGCTATACCTGCAGAACGAATGAAAATGGATAGGCCTCACTTGGTACCGCTCACCCCACAAGTACTAGAAATTCTCGAAT
TGATGAAACCGTTAAGCTTTCATAGAGAATATGTTTTCCCTTCTCATGTCGACCCCAAAAAGCCAGCTAATAAGCAATCA
GCAAATAAAGCATTGCGCGATATGGGATTTAGGGGTCGTTTAGTTGCGCATGGAATGAGGGCGCTTGCAAGTACAACGCT
GAATGAGGAAGGCTTTGATCATGACGTTATTGAAGCAGCTCTCGCGCACAAAGACGAAAACGAAGTAAGAGCAGCATACA
ACCGCGCTCAATACCTAGACCGCCGCCGCTCAATGATGGAGTGGTGGTCTAATAAAATCGTGGAGCTTTGA

Protein sequence : 
MPRNVTALSATQVKQAKPRDAEYNLSDGKGLALRIKPNGSKLWIFNYSKPHTKKRSNIGIGSYPDVSLADAREHREAFRK
LLAKDVDPKEHKDHEKEKALFSASQTFESVAKQWFEIHASKVSEGTLKNIKRSFSNDVFPLVGRVPIEQLTAPKAIEVIN
AIVGRNSHEIARKVARRMNSVMTYAVNAGIIHHNPLIGIKELIPSTKVKHQPTLQPEELPELVKALKYSSAKITTRCLIE
FQLHTMVRPGEAAEAKWSEIDFSQSIWAIPAERMKMDRPHLVPLTPQVLEILELMKPLSFHREYVFPSHVDPKKPANKQS
ANKALRDMGFRGRLVAHGMRALASTTLNEEGFDHDVIEAALAHKDENEVRAAYNRAQYLDRRRSMMEWWSNKIVEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-95 50
int AAK20773.1 integrase Not tested VPI Protein 4e-97 50
int AAK20803.1 integrase Not tested VPI Protein 4e-97 50
unnamed AAA82714.1 integrase Not tested VPI Protein 4e-97 50
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 5e-97 50
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 5e-97 50
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-86 48
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 3e-86 48
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 3e-86 48
aec33 AAW51716.1 Int Not tested AGI-3 Protein 8e-61 41
int CAC39282.1 integrase Not tested LPA Protein 7e-61 41
int AAD44730.1 Int Not tested SHI-2 Protein 1e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I876_10625 YP_008196519.1 phage integrase family site specific recombinase VFG1092 Protein 1e-86 48