Gene Information

Name : I876_00635 (I876_00635)
Accession : YP_008194557.1
Strain : Alteromonas macleodii Ionian Sea U7
Genome accession: NC_021717
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 138116 - 140044 bp
Length : 1929 bp
Strand : -
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCGAACAGACGCGAACAGCGCCAACAAGCGCAACAATTCATTAATGAATTAGCGGGCGAAGCCTACCCCAACTCAAC
ACGCCATTACGAAAGTGGAAGTAGAGACGATATCCGTGTGGCCATGCGCCTTATTCACCAGCACGACAGCTTGGTAGGCG
GCACAGAAGATAACCCTATCTTAGAACCCAACCCACCCATTCCGGTTTACGACACATCAGGCCCTTACGGCGACCCAAAG
GAAAATATTGACGTACACAAAGGTTTATCGCCTTTGCGTAAAACCTGGATTGAAGAGCGCAGCGATACCCGTGAGCTTGA
TGGCGTTTCATCAAGCTTTGCCAAAGAACGTGAAAACGATATTTTTACCGAAGACTTTCGCTTTATACGCAGTCGCAAAC
CGCTAAAAGCAAAAGCAGGCAAAAACGTTACACAGCTGCATTACGCCAGACAGGGCATTATTACCCCTGAAATGGAATAC
ATTGCCATACGCGAAAACATGGGCCGCCAAGCCATTAAAGACGCCGAGCTAACTCAGCAGCACAAAGGCGAGCACTTTGG
CGCCAATTTCCCCGAGACGATAACCCCTGAATTTGTGCGACAAGAAGTGGCCGCAGGGCGCGCTATTATTCCGTGTAACA
TTAACCACCCCGAACTAGAGCCAATGATTATTGGCCGTAACTTCTTAGTGAAAATTAACGCCAACATTGGTAATTCTGCA
GTAACGTCATCAATTGAAGAAGAGGTAGAAAAGCTGGTGTGGTCTACGCGCTGGGGCGCCGACACCATCATGGATTTATC
CACCGGCAGGAATATTCACGAAACCCGCGAGTGGCTGCTGCGAAATAGCCCAGTCCCCCTTGGTACCGTACCTATTTACC
AAGCGCTGGAAAAAGTGAATGGCGTAGCCGAAGACTTAACGTGGGAGATGTTTAAAGACACGCTTATCGAACAAGCCGAG
CAAGGGGTAGATTACTTCACTATTCACGCAGGCGTACTGCTTGAATATGTACACCTTACCGCAAAACGGGTAACCGGCAT
TGTATCTCGTGGCGGGTCGATTATGGCGAAGTGGTGTTTAAGTCGTCACCAGCAAAGCTTTTTGTACGAGCACTTCCACG
ATATTTGCGAAATTTGCGCGAAATACGATGTAGCGCTGTCGCTAGGTGATGGCTTGCGCCCGGGCAGCGTAGCAGACGCT
AACGACGATGCGCAGTTTTCTGAACTACGTACCCTTGGTGAGCTAACTAAAATTGCCTGGGAATACGATGTTCAGGTAAT
GATTGAAGGCCCAGGGCATGTGCCAATGCACATGATTAAAGAGAACATGGAAGAGCAGCTTAAGCACTGTCATGAAGCAC
CGTTTTATACCCTGGGGCCACTAACCACAGATATTGCACCGGGCTACGATCATTTCACATCCGGCATTGGTGCCGCCATG
ATTGGCTGGTATGGCTGCGCCATGCTTTGCTATGTAACCCCTAAAGAGCACCTTGGTTTACCTAACAAGGAAGACGTTAA
ACAAGGCTTAATTACCTACAAAATTGCTGCTCACGCCGCTGATTTAGCTAAAGGCCACCCGGGCGCGCAAATTCGCGACA
ACGCCATGTCGAAAGCGCGCTTTGAGTTTAGATGGGAAGATCAGTTCAATTTAGCGTTAGACCCACATACCGCGCGTGCG
TATCACGATGAAACCCTTCCGCAAGCCCCTGGCAAAGTCGCACACTTTTGCTCTATGTGCGGGCCTAAATTCTGCAGCAT
GAAAATATCTCAGGAAGTACGGGATGTCGCTAAGCAGGCGGAAAACCTAGCTCCCGCCCAAGCCGCAGAAAAAGAAAAGG
AAAAAGGCATGAAGGACATGGCGAACGCATTTAATAAATCGGGCGCCGAGCTTTATCATACCGCCGACAGTAAGGTTGAA
TTGCCATGA

Protein sequence :
MSNRREQRQQAQQFINELAGEAYPNSTRHYESGSRDDIRVAMRLIHQHDSLVGGTEDNPILEPNPPIPVYDTSGPYGDPK
ENIDVHKGLSPLRKTWIEERSDTRELDGVSSSFAKERENDIFTEDFRFIRSRKPLKAKAGKNVTQLHYARQGIITPEMEY
IAIRENMGRQAIKDAELTQQHKGEHFGANFPETITPEFVRQEVAAGRAIIPCNINHPELEPMIIGRNFLVKINANIGNSA
VTSSIEEEVEKLVWSTRWGADTIMDLSTGRNIHETREWLLRNSPVPLGTVPIYQALEKVNGVAEDLTWEMFKDTLIEQAE
QGVDYFTIHAGVLLEYVHLTAKRVTGIVSRGGSIMAKWCLSRHQQSFLYEHFHDICEICAKYDVALSLGDGLRPGSVADA
NDDAQFSELRTLGELTKIAWEYDVQVMIEGPGHVPMHMIKENMEEQLKHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPHTARA
YHDETLPQAPGKVAHFCSMCGPKFCSMKISQEVRDVAKQAENLAPAQAAEKEKEKGMKDMANAFNKSGAELYHTADSKVE
LP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68