|
Name : I876_00540 (I876_00540) Accession : YP_008194538.1 Strain : Alteromonas macleodii Ionian Sea U7 Genome accession: NC_021717 Putative virulence/resistance : Unknown Product : type III restriction protein res subunit Function : - COG functional category : - COG ID : - EC number : - Position : 113799 - 117092 bp Length : 3294 bp Strand : - Note : COG3886 Predicted HKD family nuclease DNA sequence : ATGACAGCTACAAATTATTTGGTTACCGGTAGAAACCAGCAATACCTTCTACATGAAATTCGCGATGCCCTTAAAAGCGC TACAAATATAGAAATAGCCGTTTCGTTTATTCGTATGTCAGGGCTAAGCCTAATCATTCAAGACATTGAAGATGCGATGA ATTCAGAAATACGTGATGTTAAGTTATCGCTTTTAACTTCAGACTACATGAACATTACCGAGCCACATGCGTTAAAGCGT TTAATGCTGCTGAAGGAACGTGGCGCTGATATCCGCATTTATGAAAGTAAGCAAGCTACAAGCTTTCACCTAAAATCATA TATTTTCGTCAAGAGCAGTGAAGATATATTAATTTCAGCTAGAGCGTTTGTTGGGTCTAGCAATATAAGTAAAACCGCGC TTACCGATGGTATTGAGTGGAATTACCGAATCGATTACCCAAACGATAATGATGAAGAAGCCATCGCTAGAATTGACGAA ATTCGAGAGCAGTACAGCTATCTATCCACCCTGCCTCAAGTTAAGCCACTAACATACGACTTAATAGCTGATTACGAGAT TAGGTACAACACAGCGAGAGTTGTTACACCAATTCAATCTGCTGCATCACTGCCGGATGAAAAAGAGCATGAAATTCCGG AGCCAAGAGAACATCAAGTAACAGCACTTGCAGCACTCAAGCAGGCTCGAGAGGACGGAATTAAGAAAGGCTTAGTGGTA CTAGCAACAGGTATGGGGAAAACCTACTTAGCGGCTTTTGATTCTGTGCAGGTAAATGCTAAAAAAGTACTTTTTGTAGC ACACCGAGAAGAGATCTTACTTCAAGCAGAGGCTAGCTTTCTTAAGATACACCCAAGCAAAAAGGTAGGTCGATACAGCG GAAAACAAAAGGATGAAGAATATGACTTTTTGTTTGCCTCTATACAAACCATAGGGCAATCCACTCACCTAGCGAAGTTT CCCACTGCTGCTTTCGATTACATTGTTGTAGATGAATTTCATCATGCCGCAGCAGGTGGTTATCAACGTTTACTAGAATA TTTCACGCCTTCTTTTTTACTGGGGTTAACCGCTACGCCCACTAGAACTGACGGTAGCGATATCCTTAAACTATGTGACA ACAATCTCATATATCAGCAAGACTTGTTTGATGGTGTGAAAGCAGAGGCATTATGCCCTTTTTCTTACTTCGGCATTTTC GACAAGGAAGTGGATTACGATCACCTGCCTTGGCGTAATGGTAAGTTCGATCCTGAAAAACTTTCCAATAAACTAGCGAC TAAAGGCCGTGCAAAGCATGTGCTTACTGAGTGGAAAGTAAAGTCGCAAGATGTATCACTCGCTTTTTGCGTATCGCGAA AACACGCTGACTACATGGCAGATTACTTCAATCAACAAGGAATTACAGCTGCCAGCGTTCACTCAGACTCGTCACTTACG CGTAGTGAGGCATTAGAGAAGCTCAACAACGGCGATATTAAAATTTTATTCTCGGTAGACCTTTTCAACGAAGGTGTAGA TTTACCGAAGATCGATACCGTATTAATGCTTAGGCCTACTGAATCAAAAATCCTTTTTTTACAACAGATGGGCCGCGGCC TTCGTAAAAGCGAAGGAAAGGATAGACTTATTATTTTAGACTTTGTGGGTAATCATCATAGCTTTTTAAACCGCCCCGAA ATGCTGTTTGCCAGTATTCTCGATGGACCGCAAAACCGCAGAAAAATGGTCGACCTTGCAAAAAATGCCAATAAACTACT CCCCGACGGATGTTACGTTAATTTCGACTTAGAGTTTATCGATTTCCTTACAAGCATCTCTCAAGACGAGCTTGATACTC AATACGACAAGCTGAAGGAAACGCTAGGCAGAAGGCCTACGTACACTGAGTTTTATAAATCGGGCGCTAGCTTGGAAAAA CTAAGACGAAACCGTGGCTCGTGGTGGGAATTTGTTGATAGCAAGGGCGACCTTAAAGCTGACGAACTGGAAGTGCTGGA AGAACATCTGCAATGGTTTAAAGACCTAGCTGTTACTCGTACTTCGAAGTGCTACAAGCTGGTGTTACTTGCCACGCTGA TTGAGCATAAAGCTTTTCAGTCACAGGTAAGTGTTGATGACTTAGCAGAATGGGCACGACAGTGGTTTTTAGATAACCCA GAATGGATTTCTGACTTGCCAGAAAGCAAACAGCAATTATCGTCGTTAAGTAAATCAGAATGGCGAGCGCATTGGCGTAG TAATCCAGTTAAGTTTTGGTGCACTGAAGAGCCTGAATCAAAGGTTGCTTGGTTTGATATTAGTAATCAGCAATTTCATT TCAAACAAAGTATTTCAGCAATCCAACATGATTTGTTTTTAGCAATGTCCGTTGAGATTAATAACCAACGTCTTGCGAAC TACAGACATAAGAAGTTAGCTATAACGGCCCCTTCTTCCAATAATATTGTTCAGTTTCCCGAGAAAGTGCAGCTACCATT TTTCCCCGATATTAAAATAGCTTGCGGCCATTTCAAAACCGGTAATGCCGAGTCGTCTGAACTTGTAAATGTACCATACG GCTATGGGAATATAGATAATTCGCGCCACTTCATTGCTCGCGCATCTGGTAACTCGATGAACGGTGGTAAGAACCCTATT TATGATGGTGACTACTTGCTCTTAGAGCAAATCACACCGAATAATGCTGGCAGTATTAGCAACACAACTGTTGCTATCGA GAGGCAGGATGAAATGGGCGATAATCAGTACTTGCTAAGAAAGGTACTTAAAAACCCGGATGGTTCTTATACCTTAAGGG CTGCCAACCCAGACTATGGCGATATCATAGCAAGTGAAGAAATGGTGACATTCGCGCGCCTAAAAGGAAAAGTCGACCCG CTGGAACTTTTCGTAGGACACGAGCTAATGCGTGAAGAGATTCCACCATTATTTGATGAAGAGTTTAACCCCGGAAATTG GCAATCGGGGCATGTGGTGCTCAAAGAGAAGAATGTTCAGATTTTGTTAGTTACTCTAAACAAACAAGGAAAAGGCAGTG AGCACCAGTACCATGATTACTTTATTGACGATAAGCATTTTCATTGGCAGTCGCAAAATAGTACTTCCCCAAGTAACAAG CGTGGCAGAGAGATAATTGAACATCAGAAATTGGGGAGCCGCGTTTACCTCTTCGTTCGAGAGAGCAAATTGAGAGGGAA AACAGCCGCACCTTTTATGTTCTATGGCGAAGTGAAATACGTTAAACATGAAAGTGAAAAACCGATGAATGTGACTTGGG AGTTATTGAATTAA Protein sequence : MTATNYLVTGRNQQYLLHEIRDALKSATNIEIAVSFIRMSGLSLIIQDIEDAMNSEIRDVKLSLLTSDYMNITEPHALKR LMLLKERGADIRIYESKQATSFHLKSYIFVKSSEDILISARAFVGSSNISKTALTDGIEWNYRIDYPNDNDEEAIARIDE IREQYSYLSTLPQVKPLTYDLIADYEIRYNTARVVTPIQSAASLPDEKEHEIPEPREHQVTALAALKQAREDGIKKGLVV LATGMGKTYLAAFDSVQVNAKKVLFVAHREEILLQAEASFLKIHPSKKVGRYSGKQKDEEYDFLFASIQTIGQSTHLAKF PTAAFDYIVVDEFHHAAAGGYQRLLEYFTPSFLLGLTATPTRTDGSDILKLCDNNLIYQQDLFDGVKAEALCPFSYFGIF DKEVDYDHLPWRNGKFDPEKLSNKLATKGRAKHVLTEWKVKSQDVSLAFCVSRKHADYMADYFNQQGITAASVHSDSSLT RSEALEKLNNGDIKILFSVDLFNEGVDLPKIDTVLMLRPTESKILFLQQMGRGLRKSEGKDRLIILDFVGNHHSFLNRPE MLFASILDGPQNRRKMVDLAKNANKLLPDGCYVNFDLEFIDFLTSISQDELDTQYDKLKETLGRRPTYTEFYKSGASLEK LRRNRGSWWEFVDSKGDLKADELEVLEEHLQWFKDLAVTRTSKCYKLVLLATLIEHKAFQSQVSVDDLAEWARQWFLDNP EWISDLPESKQQLSSLSKSEWRAHWRSNPVKFWCTEEPESKVAWFDISNQQFHFKQSISAIQHDLFLAMSVEINNQRLAN YRHKKLAITAPSSNNIVQFPEKVQLPFFPDIKIACGHFKTGNAESSELVNVPYGYGNIDNSRHFIARASGNSMNGGKNPI YDGDYLLLEQITPNNAGSISNTTVAIERQDEMGDNQYLLRKVLKNPDGSYTLRAANPDYGDIIASEEMVTFARLKGKVDP LELFVGHELMREEIPPLFDEEFNPGNWQSGHVVLKEKNVQILLVTLNKQGKGSEHQYHDYFIDDKHFHWQSQNSTSPSNK RGREIIEHQKLGSRVYLFVRESKLRGKTAAPFMFYGEVKYVKHESEKPMNVTWELLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A0337 | YP_001216293.1 | DEAD/DEAH box helicase | Not tested | VPI-1 | Protein | 0.0 | 46 |
