Gene Information

Name : OEM_28870 (OEM_28870)
Accession : YP_008188752.1
Strain : Mycobacterium yongonense 05-1390
Genome accession: NC_021715
Putative virulence/resistance : Unknown
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 3077110 - 3080355 bp
Length : 3246 bp
Strand : +
Note : -

DNA sequence :
GTGGGTGTCATCGCCACCGTGTCGCTGCTGGGCAGTGTGTCCCCCCTGATCCGTTACCTGATCAAGGTGCCGCGCGAGTT
CATCAACGACTATCTGTTCAACTTCCCCGACACCAGCATCGCGTGGTCGTTCGTGTTGGCCTTGCTGGCCGCGGCCCTGA
CCGCGCGCAAGCGGATCGCCTGGCTGCTGTTGCTGGGCAACATGATTCTCGCCGCCGGCCTGAACGCCGCCGATATCGCC
GCCGGGGACAACACCGCCGCCGAGATCTTGGGCGAGAATCTCGGGTTCGCCCTGCACATCGTCGCGATCGTCCTGCTGGT
GTTGGCCTATCGGGAGTTCTGGGCCAAGGTCCGCCGGGGCGCGCTGGTCAAGGCGGCCGGCGTGCTGGTGGCCGGCGATG
TGGTGGGGATCTTGGTGTCCTGGGGCCTGGTCGAGTTGTTCCCCGGAACGCTGGCCCGCCCGGATCGCCTGCCCTACGTG
GCCAACCGGGTGGTCGGATTCGCGCTCGCCGATCCGGACCTGTTCACCGGCCGGCCGCACGTGTTCCTCAACGCGATCTT
CGGTCTGTTCGGCGCGCTCGCGCTGATCATGGCGACGATCGTGCTCTTTCAATCGCAGCGCGCGGAGAACGCGCTCACCG
GCGAGGACGAATCGGCCATCCGCGGGCTGCTCGAGCTGTACGGCAAGAACGACTCCCTGGGCTACTTCGCCACCCGCCGC
GACAAGTCGGTGGTTTTCGCCCAGAGCGGGCGCGCCGCCATCACCTACCGGGTCGAGGTCGGCGTCTGCCTGGCCAGCGG
CGACCCGATCGGCGATCCCCGGGCGTGGTCCCAGGCCGCCGACGCCTGGCTGGGTCTGTGCCAAACCTACGGCTGGGCGC
CCGGGGTCATGGGCGCCAGCACCCAGGGGGCGCGGACATATCGCGAAGCCGGCCTGAACGCGCTGGAGCTCGGCGACGAG
GCCATCCTGCGGACCGCCGACTTCAAGCTGTCCGGCCCCGACATGCGCGGAGTCCGACAGGCCGTGACCCGCGCCCGCCG
GGCCGGCCTGACCGTGCGGATCCGGCGGCACCGCGACATCGGCGCCGACGAGATGGCCGACACCATCACCCGCGCCGACG
CCTGGCGCGACACCCAAACCGAGCGCGGGTTTTCGATGGCGCTGGGCCGCCTAGGCGATCCCGCCGACGGGGACTGCCTG
CTGGTCGAGGCCCTGGACCGGGACGGCGCCGTCGTCGCGATGCTGTCGCTGGTCCCGTGGGGAACCACCGGCGTCTCCCT
GGACCTGATGCGCCGATCGCCGCAGTCCCCCAACGGCACCATCGAGCTGATGGTCAGCGACCTCGCACTCAACGCGGAAA
ACCTTGGCATCACCCGCATTTCACTGAACTTCGCGATGTTCCGCTCGGCTTTCGAACAGGGTGCCCAACTGGGCGCCGGC
CCCGTCGCGCGGCTGTGGCGCGGGTTCTTGCTGTTCTTCTCGCGGTGGTGGCAGCTGGAGACGCTGTATCGCTCCAACAT
GAAGTACCAGCCCGACTGGGTGCCGCGGTACGCCTGCTACGAGGACGCCCGCCTGATCCCGCGGGTCGGGGTCGCCTCGG
CGCTGGCCGAGGGCTTCCTCGTCCTGCCGTTCGGCCGGCGCAAGCCGCACACGGGTCACCACCCGGCCGTCCCCGCCCGG
CTGGCCGCGTCCGGGCTGTTGCACCACGACGGGAGCGCGCCGGACGTCAGCGGGCTGCAGAGGCGCCAGGAGTCGGCCGA
CGAGGAAGAGGCGAGATCCCGGCTGCCCGAGCAGGTTCGGGTGCGCCTGGCCAAGTTGAAGGTGTTGCGGCGCAAGGGCA
TCGACGCGTATCCGGTGGGCCATCCGCCCAGTCACACGGTCGCCGCGGCGCTCGACACGGACGACCGGGAGACGATCACC
GTCTCCGGCCGGATACTGCGAATACGCGACTACGGCGGGGTGCTGTTCGCCCACCTGCGTGACTGGTCGGGGGAAATGCA
AGTGCTGCTGGACAATTCGCAGTTGCAGCGCGGGCGAACGGCCGACTTCACGGCGGCCATCGATCTCGGCGACTTGGTCG
AGGTCTCCGGCCACATGGGCTTTTCCAAGAAGGGAACCCGCTCGCTGATCGTCGGCGACTGGCGGATGATCGGTAAGTGC
TTGCGGCCGTTGCCCAACAAGTGGAAGGGGCTGACCGATCCGGAGGCCCGGGTGCGGACCCGCTACGTCGACCTGGCGGT
CAATCCCGAGTCTCGCGAATTGATCACGGCGCGCAGCGAGGTGTTGCGCTCGGTCCGGCAGACGCTGTTCGACAAGGGGT
TCATCGAAGTCGAGACCCCGATCCTGCAGCAGATCCACGGCGGAGCCACGGCCCGGCCGTTCGTCACGCACATCAACACC
TACGACATGGACCTGTTCCTGCGGATCGCGCCGGAGCTCTACCTCAAGCGGCTATGCGTCGGCGGCGTCGAGCGGGTCTT
CGAACTGGGCCGGGCCTTCCGCAACGAGGGCGTGGACTTCAGCCACAACCCGGAGTTCACCCTGCTGGAGGCGTACCAGG
CGCACGCCGACTACAAGGTCTGGATCGACGGGTGCCGCGAGCTGATCCAGAACGCCGCCGAGGCCGCCCACGGCGAGCAG
GCCGTCATGCGCCCACGCGACCAGGGCACCGGTGGCGGCCTCGAGCCGGTCGACATCTCCGGCGTGTGGGCGGTCAAGAC
CGTGTACGACGCCGTCTCCGAAGCGCTCGGCGAGCACATCGACCCCGCCACGCCGCTGCCCGCGCTGCGCAAGCTGTCGG
ACGCCGCGCACATTCCGTATCGGGCGCACTGGGACGCCGGCGCGGTGGTGCTGGAGCTGTACGAACATCTGGTCGAGGAC
CGGACCGAGGAGCCGACGTTCTATATCGACTTCCCGACGTCGGTGTCGCCACTGACCCGCCCGCATCGCAGCGAGCCCGG
CGTCGCCGAACGGTGGGACCTGGTGGCGTGGGGTGTCGAGCTGGCCACCGCCTACAGCGAGCTCACCGATCCGGTGGAAC
AGCGTCGCCGCCTGCAGGAGCAGTCGCTGTTGGCCGCGGGTGGGGATCCCGAGGCGATGGAGCTCGACGAAGACTTCCTG
CAGGCGATGGAATACGCGATGCCGCCCACCGGCGGGCTCGGGATGGGCGTCGATCGCCTCGTCATGCTCATAACGGGGCG
CAGCATCCGGGAGACGCTGCCGTTCCCGCTGGCCAAACCCCATTAA

Protein sequence :
MGVIATVSLLGSVSPLIRYLIKVPREFINDYLFNFPDTSIAWSFVLALLAAALTARKRIAWLLLLGNMILAAGLNAADIA
AGDNTAAEILGENLGFALHIVAIVLLVLAYREFWAKVRRGALVKAAGVLVAGDVVGILVSWGLVELFPGTLARPDRLPYV
ANRVVGFALADPDLFTGRPHVFLNAIFGLFGALALIMATIVLFQSQRAENALTGEDESAIRGLLELYGKNDSLGYFATRR
DKSVVFAQSGRAAITYRVEVGVCLASGDPIGDPRAWSQAADAWLGLCQTYGWAPGVMGASTQGARTYREAGLNALELGDE
AILRTADFKLSGPDMRGVRQAVTRARRAGLTVRIRRHRDIGADEMADTITRADAWRDTQTERGFSMALGRLGDPADGDCL
LVEALDRDGAVVAMLSLVPWGTTGVSLDLMRRSPQSPNGTIELMVSDLALNAENLGITRISLNFAMFRSAFEQGAQLGAG
PVARLWRGFLLFFSRWWQLETLYRSNMKYQPDWVPRYACYEDARLIPRVGVASALAEGFLVLPFGRRKPHTGHHPAVPAR
LAASGLLHHDGSAPDVSGLQRRQESADEEEARSRLPEQVRVRLAKLKVLRRKGIDAYPVGHPPSHTVAAALDTDDRETIT
VSGRILRIRDYGGVLFAHLRDWSGEMQVLLDNSQLQRGRTADFTAAIDLGDLVEVSGHMGFSKKGTRSLIVGDWRMIGKC
LRPLPNKWKGLTDPEARVRTRYVDLAVNPESRELITARSEVLRSVRQTLFDKGFIEVETPILQQIHGGATARPFVTHINT
YDMDLFLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYKVWIDGCRELIQNAAEAAHGEQ
AVMRPRDQGTGGGLEPVDISGVWAVKTVYDAVSEALGEHIDPATPLPALRKLSDAAHIPYRAHWDAGAVVLELYEHLVED
RTEEPTFYIDFPTSVSPLTRPHRSEPGVAERWDLVAWGVELATAYSELTDPVEQRRRLQEQSLLAAGGDPEAMELDEDFL
QAMEYAMPPTGGLGMGVDRLVMLITGRSIRETLPFPLAKPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lysX YP_003784331.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 6e-161 43
lysS1 YP_005686365.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 6e-161 43
lysS1 YP_005682181.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 2e-160 43
lysS1 YP_005684273.1 lysyl-tRNA synthetase Not tested PiCp 7 Protein 6e-161 43