Gene Information

Name : OEM_28230 (OEM_28230)
Accession : YP_008188688.1
Strain : Mycobacterium yongonense 05-1390
Genome accession: NC_021715
Putative virulence/resistance : Unknown
Product : ISChy4 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2995818 - 2996669 bp
Length : 852 bp
Strand : +
Note : -

DNA sequence :
ATGACCCCCACCCCGCGCACCGGAAAGCCCACCACCACGACCGAGGAATCGCCGTCGGCGGCGGCGAGCCGCTATCAGCA
GTTGCGTTCGCATCTGGCCGAGCTCAAACTGGCCGCGGCCGCCGAAGCCCTACCGGCGGTGCTCGACCAGGCCACCGCTG
AGGGGCTGTCGCTGACCGTTGCCTTGGAGCGGCTGCTGGCCGTGGAGGTCGAGGCCAGCACTGCCCGACGGTTGGCCGGG
CGGCTGCGGTTCGCCTGCATACCCACCCCGGCCACCCTGGCCGATTTCGATGTCGATGCCGCCGCCGGGATCGACCGCAA
GCTGATCGACGAGCTGGGCACCTGCCGCTACCTGGAATCGGCGACCAACATCCTGCTCATCGGCCCGCCCGGGACCGGCA
AGACGCACCTGTCCGTCGGGTTGGCAAGGGCCGCAGCCCATGCCGGATACCGGACGTACTTCACCACCGCCGCTGATCTG
GCCGCACGGTGTCACCGTGCCGCGATCGAGGGACGCTGGGCCACCACCATGCGCTTCTTCGCCGGCCCGACCCTTCTGGT
GATCGATGAACTCGGCTACCTTCCGTTGCCCGCCGAAGCCGCTTCGGCATTGTTTCAGGTTGTCTCCCAACGCTATTTGA
AGACCAGCATCGTGATCACCACCAACCGCGGGGTGGGTGCATGGGGTGACATCCTCGGCGACACCACCGTGGCCGCCGCC
ATGCTCGACCGCCTGCTGCACCGCTCCGTGGTCATCAACCTCGACGGCGAGTCCTACCGCCTCCGCGACCACCACGCCGC
CGCGGAAACCCTGCGCCGAACCACCACCGGCACCCGCCAACAACTACACTGA

Protein sequence :
MTPTPRTGKPTTTTEESPSAAASRYQQLRSHLAELKLAAAAEALPAVLDQATAEGLSLTVALERLLAVEVEASTARRLAG
RLRFACIPTPATLADFDVDAAAGIDRKLIDELGTCRYLESATNILLIGPPGTGKTHLSVGLARAAAHAGYRTYFTTAADL
AARCHRAAIEGRWATTMRFFAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGAWGDILGDTTVAAA
MLDRLLHRSVVINLDGESYRLRDHHAAAETLRRTTTGTRQQLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 7e-31 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 7e-31 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 7e-31 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-30 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 7e-31 42
unnamed CAA21402.1 - Not tested HPI Protein 1e-30 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 7e-31 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-30 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 7e-31 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 9e-31 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 9e-31 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 7e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OEM_28230 YP_008188688.1 ISChy4 transposase VFG1515 Protein 4e-31 42
OEM_28230 YP_008188688.1 ISChy4 transposase VFG1627 Protein 4e-31 42
OEM_28230 YP_008188688.1 ISChy4 transposase VFG1606 Protein 4e-31 42
OEM_28230 YP_008188688.1 ISChy4 transposase VFG1663 Protein 6e-31 42