Gene Information

Name : I636_01365 (I636_01365)
Accession : YP_008182271.1
Strain : Alteromonas macleodii Ionian Sea UM4b
Genome accession: NC_021714
Putative virulence/resistance : Virulence
Product : two component response regulator transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 311260 - 311943 bp
Length : 684 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAATACTTGTAGTCGAAGACGAAGTAAAAACGGGCGATTACATCAAACAAGGGCTCATTGAATCCGGCTTTGTTGT
AGAATTAGTAAGGACTGGCCTGGATGGTCACCACAAATCGATGATTGGTGATTATGAATTAATCGTACTCGATGTAATGC
TGCCCGACATAGAAGGTTGGAAAATCCTGTCTTCATTGAGAGAGTCTGGTAAATTTACACCCGTTCTTTTTTTAACCGCT
CGCGATCACGTTAATGACAGAGTCAAAGGACTTGAGTTAGGCGCAGACGATTATTTGGTTAAACCGTTTGCTTTCGCGGA
ACTCCTCGCAAGAGTGCGCACCTTGATCAGGAGAGGGACTTCTGTCCCTAACAACACGTTACACATTGCAGATTTGGAGC
TTGATATCCCTTCTCGCGTTGCGAAGCGCGGTGGCAAAGTAATCAATCTGACGACTAAAGAGTTTACATTGCTTGAACTA
ATGGTCAGACGTCAAGGTGAAGTATTGCCCCGTTCTTTGATCGCCTCTCAGGTATGGGACATGAATTTTGACAGTGACAC
GAATGTCATTGATGTCGCTATCCGAAGATTGCGTGCAAAAATTGATGATGACTTTCCTGTAAAGCTAATTCAAACTGTCA
GGGGGATGGGCTATAAAATGAGTGTAGATGATAGTAACGAATAA

Protein sequence : 
MKILVVEDEVKTGDYIKQGLIESGFVVELVRTGLDGHHKSMIGDYELIVLDVMLPDIEGWKILSSLRESGKFTPVLFLTA
RDHVNDRVKGLELGADDYLVKPFAFAELLARVRTLIRRGTSVPNNTLHIADLELDIPSRVAKRGGKVINLTTKEFTLLEL
MVRRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRAKIDDDFPVKLIQTVRGMGYKMSVDDSNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-58 55
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-58 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator BAC0111 Protein 5e-71 65
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator BAC0083 Protein 4e-71 65
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator BAC0638 Protein 4e-63 64
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator BAC0308 Protein 7e-66 62
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator BAC0197 Protein 7e-68 61
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator BAC0347 Protein 8e-65 59
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator BAC0125 Protein 2e-63 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator VFG0596 Protein 7e-59 55
I636_01365 YP_008182271.1 two component response regulator transcriptional regulator VFG1390 Protein 4e-38 41