Gene Information

Name : I636_10550 (I636_10550)
Accession : YP_008184082.1
Strain : Alteromonas macleodii Ionian Sea UM4b
Genome accession: NC_021714
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2374960 - 2375604 bp
Length : 645 bp
Strand : -
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
GTGATAAAAATAATCCTAGCAGACGACCACGACTTGGTCAGAACAGGGATACGCCGGATACTGGAAGATGTGGAAGACTT
CACGATTCTCGCAGAAGCGAAAAACGGTGAAGACGCGGTACAGAAGTGCCGTAAAAATGCCCCAGATGTGGTACTCATGG
ACGTGAATATGCCCGGGATAGGCGGGTTAGAGGCAACGAAAAGAATTGTTCGTATGTCGGAAAACACTCGGGTGATTTGT
GTTTCTATGCACAAAGAAAGCCCAATTCCTATGCAAGTGATGGACGCGGGCGCGTATGGGTTTCTCTCCAAAGATGCTGA
ACCCAAAGAGGTAATTCTTGCCATTCGTAAAGTGGCGGCAGGGCAGAAATACCTTGATAGCGAAGTGGCCAATAGTATTG
CTATTGGCAAGTTGTTGCCCAGTTCAGATAATCCATTTGACGATTTATCGAGTAGAGAACTTACCATAGCAATGCGATTA
ACAGAAGGGCACAAAGTGCCTGATATCGCTCGCGAGCTTAGTATTAACTCTAAAACGGTTAACACCTATCGTTATAGAAT
GTTTCAAAAGTTAGGCGTGAATTCTGACGTAGAGTTAACGCATTTAGCCTATCGTCATAAACTTATCAATCCTAACACCT
TTTAA

Protein sequence :
MIKIILADDHDLVRTGIRRILEDVEDFTILAEAKNGEDAVQKCRKNAPDVVLMDVNMPGIGGLEATKRIVRMSENTRVIC
VSMHKESPIPMQVMDAGAYGFLSKDAEPKEVILAIRKVAAGQKYLDSEVANSIAIGKLLPSSDNPFDDLSSRELTIAMRL
TEGHKVPDIARELSINSKTVNTYRYRMFQKLGVNSDVELTHLAYRHKLINPNTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 5e-44 47
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 5e-44 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I636_10550 YP_008184082.1 two component LuxR family transcriptional regulator VFG1889 Protein 6e-48 49