Gene Information

Name : I636_05840 (I636_05840)
Accession : YP_008183148.1
Strain : Alteromonas macleodii Ionian Sea UM4b
Genome accession: NC_021714
Putative virulence/resistance : Virulence
Product : N-6 DNA methylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1279260 - 1281689 bp
Length : 2430 bp
Strand : +
Note : COG0286 Type I restriction-modification system methyltransferase subunit

DNA sequence :
ATGGATCATAGTGTACATAACAAGCTCATCTCATTTATTTGGAACATTGCCGACGACTGTTTACGTGATGTGTACGTTCG
CGGTAAGTACCGCGATGTGATTTTACCTATGGTGGTATTACGACGTTTAGATACGTTACTAGAACCTACCAAAGAAGCCG
TGCTTGAAGAGGTAAAGTTCCAAAAAGAAGAGATGCAAGCCACGGAGCTTGATGATGAACCATTAAAAGCGGCCAGTGGT
TATGTTTTTTACAATACATCTAAATGGACGCTGAAATCCCTGTTCAACACCGCAACGAATAACCAACAGATATTACTCGC
CAACTTTGAAGAGTACCTGCTTGGCTTTAGCGATAACGTTAAAGAAATCATTGAATGCTTTAATCTCAAATCGCAAATTC
GTCACATGGCCTCCAAGCAAGTCCTTCTTGATGTCGTCGAAAAGTTTGTTTCCCCTTACATCAACCTAACTCATGAAACG
GTCGAAGACCCAGATGGCAACAAGATGCCAGCCCTTACTAACCTGGGTATGGGTTACGTGTTCGAGGAGTTGATCCGCAA
GTTCAACGAAGAAAACAACGAAGAAGCAGGTGAACACTTTACACCACGTGAAGTGATTGAATTGATGACGCACCTGGTGT
TCGACCCAGTGAAAGACCAGTTGCCGCTTACCATGACAGTGTATGACCCTGCGTGTGGTAGCGGTGGTATGTTGACTGAA
TCTCAAAACTTCATTGAAGAGAAATACCCGAACGACAGCCGTGATGTTTACCTTTACGGCAAAGAGATCAACGACGAAAC
CTACGCGATTTGTAAATCGGACATGATGATCAAAGGTAACAACCCTGAGAACATCAAAGTAGGCTCAACCTTGTCTACCG
ATGAGTTCGCGGCTTCACGCTTTGACTTTATGTTGTCTAACCCGCCATATGGTAAGAGTTGGGCGTCTGAACAGAAGCAC
ATTAAAGACGGCAGTGATGTGATTGACCCTCGTTTTAAGGTTAGCCTGAAAGACTATTGGGGAAATCTCGAAGTGGTAGA
TGCCACGCCACGTTCAAGTGATGGCCAGCTGCTCTTCTTAATGGAAATGGTCAACAAGATGAAAGATCCGAGTGTAAGCC
CATTAGGCAGCCGGATTGCTTCTGTTCATAACGGCTCATCGCTCTTTACCGGTGATGCGGGCGGTGGCGAAAGTAACATT
CGTCGCTTCATCATTGAAAACGACATGCTAGATGCCATCGTTCAGTTACCTAATAACCTGTTCTACAACACCGGCATTAC
CACTTACATTTGGGTGTTGAACAACAATAAACCTGAGGCACGTAAAGGTAAGGTGCAACTGATTGATGCCAGCTTGCTAT
ACCGTAAGTTGCGTAAGAACTTAGGTAACAAAAACTGCGAATTTGCACCTGAGCACATTACGGAAATTACCGATACTTAC
CTGGCGTGTATGGATGTTGAAAGAGCACTTGATGCAAACAATGATCCGATCGGCATCGCCAGCAAGGTGTTTAGCAATGA
CGATTTTGGCTACTACAAAGTCACTATCGAGCGCCCAGATCGCCGCAGAGCCAAGTTCACTCAAGACGCAATAGCCCCAC
TGCGTTTTGATAAGCAGCTCAGTGAAGTGATGGAGCACGTTTACGCAGAGCACGGCGAACGTGTTTACGAAAAAACTGGC
TACGGGTCTGATCAGAAAAAGAGCTTCTTAAAATCCATTGAGAAGGACATTCTTTCTTGGTGTGAAGATAACGACATCAG
TCTCAATGCAAAGGCTAAGGCAAAACTGCTCGATGTGAAACATTGGCTGGCGCTAAAAGCATTGCTTGAAACGGCACAAA
CGCTGATGGCTGATATCGGTAGCAATGAATTTGATGACTTCAATAGCTTTAAAACCCAAGTTGATAAATCACTAAAAGCC
CACGCCATTAAGCTTTCAGCACCTGAGAAAAATGCCATCCTAAACGCGGTGAGCTGGTATGACGAAACCGCCAAGAAAGT
GGTTAAAAAGGTAGTTAAATTAACGGGTGATAAATTAGACGACCTCCTGGAGCGCTACGAGTGTGAAGTCGCTGACCTGC
CAGATTTTGGTTATTACCCCGTTCCTAGAGAAGAAGGCGGTAAAAAGGGCGAGTTCATCACTTACGAAACCAACTCAGAC
CTGCGAGACACAGAATCTGTCCCGCTGAAGCAAAGCATTTACCAGTACTTCCTAGACGAAGTGAAGCCACATGTTGATGA
AGCGTGGATAAACCTGGATACGGTGAAAATTGGTTATGAAATCAGCTTCAATAAGTATTTCTACCGTCATAAACCGCTGC
GTAGTTTAGAAGAGGTGGCAACCGACATCATCAACCTGGAACAAAAAGCCGAAGGTCTTATTGCGCAGATATTGGGTGTG
AACGTGGCGGAAGTTCAGGGAGAAGCGTAA

Protein sequence :
MDHSVHNKLISFIWNIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPTKEAVLEEVKFQKEEMQATELDDEPLKAASG
YVFYNTSKWTLKSLFNTATNNQQILLANFEEYLLGFSDNVKEIIECFNLKSQIRHMASKQVLLDVVEKFVSPYINLTHET
VEDPDGNKMPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPVKDQLPLTMTVYDPACGSGGMLTE
SQNFIEEKYPNDSRDVYLYGKEINDETYAICKSDMMIKGNNPENIKVGSTLSTDEFAASRFDFMLSNPPYGKSWASEQKH
IKDGSDVIDPRFKVSLKDYWGNLEVVDATPRSSDGQLLFLMEMVNKMKDPSVSPLGSRIASVHNGSSLFTGDAGGGESNI
RRFIIENDMLDAIVQLPNNLFYNTGITTYIWVLNNNKPEARKGKVQLIDASLLYRKLRKNLGNKNCEFAPEHITEITDTY
LACMDVERALDANNDPIGIASKVFSNDDFGYYKVTIERPDRRRAKFTQDAIAPLRFDKQLSEVMEHVYAEHGERVYEKTG
YGSDQKKSFLKSIEKDILSWCEDNDISLNAKAKAKLLDVKHWLALKALLETAQTLMADIGSNEFDDFNSFKTQVDKSLKA
HAIKLSAPEKNAILNAVSWYDETAKKVVKKVVKLTGDKLDDLLERYECEVADLPDFGYYPVPREEGGKKGEFITYETNSD
LRDTESVPLKQSIYQYFLDEVKPHVDEAWINLDTVKIGYEISFNKYFYRHKPLRSLEEVATDIINLEQKAEGLIAQILGV
NVAEVQGEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 78
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 78
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I636_05840 YP_008183148.1 N-6 DNA methylase VFG1102 Protein 0.0 78